Rhipicephalus sanguineus (brown dog tick): 119394090
Help
Entry
119394090 CDS
T07382
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119394090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119394090
03036 Chromosome and associated proteins [BR:
rsan03036
]
119394090
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119394090
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119394090
PBAF complex
119394090
GBAF(ncBAF) complex
119394090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SCHIP-1_C
Motif
Other DBs
NCBI-GeneID:
119394090
NCBI-ProteinID:
XP_037517250
LinkDB
All DBs
Position
5:106277526..106320824
Genome browser
AA seq
1156 aa
AA seq
DB search
MAVVQRKRDGGPNLKFYESSETIALFDAVRVWLHKNCKKYTQAEPPTNKGLSSLVIQLIQ
FQEDAFGRSVSKPPLTRLPMKCFMDFKPGGALCHIFAAVYKFKSEQGWRRFDFQSPSRMD
RNVEMFMTVEKTLVQNKCLSLPHIYISSEVEKQLVSRLKDIIKRHQGTIAESPDDATHIV
YPPVPTTDTSEEYVRLVMKRDRSALIHWWYFPDSFDTWVSGLDIDMEPDSPQTHTGPYEV
NAKWLVDLDEYNEWMNEEDYEVETDAMGRRRSPRGKYTLDELLSGEGEKRDRKGIKKRKR
SPSPPLDKRKRKGGRSPAMGKKRSFRDDESDDLTKDMEEPSPEPSLQEVSIPRSNPNQRS
SKDSELQPVKGGTLIDLDGADMDDKGDRDKGSRPGSPNGVGKSEKAEAHDDNVTEQANHI
IIPSYAAWFDYNSIHAIERRALPEFFNAKNKSKTPEVYIAYRNFMIDTYRLNPTEYLTVT
ACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDAESRPSPMGPPSTSHFHVLADTPSGLQPL
NPPRTQQPSAAQQMLNLDKAKEEGGGGKDEGGGIPARGGAANATTIGGDALGLKMDQYAK
KQAYLRHKAAATVSREWTEQETLLLLEALEMYREDWNKVCEHVGSRTQDECILHFLRLPI
EDPYLDDPAAGGGALGPLAFQPIPFSKAGNPIMSTVAFLASVVDPRVASSAAKAAMEEFA
KIKDEVPSALLDAHIKNVETAAAEGNVNPKAGLGMTGIAGTGDKEPQEGTAEPSTGEESE
KAEEGKEGTEPSLSAAEVKLEKPSSSEENSSASAEGAPSAASSTGAVATPTGGAGGESED
KAKAAKLAEEPSKESPAAPDQESTEEPKAPETDRDRLVKDAQLSTAAAAALGAAAVKAKH
LAAVEERKIKSLVALLVETQMKKLEIKLRHFEELEAIMDRERETLEYQRQQLIQERQQFH
LEQLRAAEFRARQQAHAMMMAQQGGTTASQPAAAPTPPGAPPAAPPPAAAGGGVPTPDGG
GDPGQHPPRTGSGPPLPSPHPQQQQQLPPQQQRSPYYPGYGSAPPPVGGAPRPFPPTGGG
PPAVGYGAAPYPQPGGEQAFRMPLGSSPQPGGVGGVRSPGMMHQSSAPPPTSSMGQQHPS
GSYRQHSSSIFSGHPF
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgttcaaagaaaaagggacggtgggccaaacttgaaattttacgaatcctcg
gaaactatcgcgctgtttgacgctgttagagtatggctccacaaaaactgcaaaaagtac
acgcaagccgaaccacctacgaacaaggggttgtcaagcttggttatccagctgattcag
tttcaagaagatgctttcgggagaagtgtgagcaagccgccgctgacacggctcccgatg
aaatgctttatggactttaaacctggaggtgcactttgccacatctttgctgctgtctac
aaattcaagagcgagcagggatggcgcaggtttgacttccagtccccatcacgcatggac
cgcaatgtggagatgttcatgacagtggagaaaaccctggtgcaaaacaagtgcttgtct
ctgcctcacatttatatatcctctgaggtggagaagcagttggtgtcgcgcctgaaggac
attatcaaaaggcaccagggcactattgcagagtcccctgatgatgccacccacatagtc
tacccacccgtgcccacgacggatacctctgaagaatacgtgcgcttggtgatgaagcgg
gatcggagtgctctcatccactggtggtattttcccgacagctttgacacctgggtgtct
ggtctggacatagacatggagcctgactcacctcaaacacacactggaccgtatgaggtc
aatgccaagtggcttgtagatttagacgagtacaacgaatggatgaatgaggaagattat
gaggttgagacagacgccatgggtcgcaggcggtctcccaggggaaagtacactttggat
gagctgctctctggagaaggagagaaacgcgaccgaaaaggcatcaagaaacgaaagagg
tctccatcccctcccctggacaagcggaagcgcaagggagggcgcagcccggctatgggt
aaaaaacgctcattccgcgatgacgaatccgacgacctgactaaagacatggaggagccc
tcccccgagcccagtcttcaggaggtctccattccccgaagtaacccaaatcaacgtagc
agcaaggacagtgagctgcagccggtcaaaggaggcacccttatagacctggatggggcc
gacatggatgacaagggtgaccgagacaaaggctcacgaccaggcagccccaatggcgta
ggcaagagtgaaaaggccgaagctcatgacgacaatgtaaccgaacaggccaaccacatc
atcattcccagctatgcagcctggtttgattacaatagtattcatgccattgaaaggcgt
gccctaccagagtttttcaacgccaagaacaaatccaagacgcccgaagtctatatcgca
taccgcaacttcatgatcgacacgtaccggctcaatccaacggagtatctgacggtgacc
gcgtgccggaggaatctggcaggagatgtttgtgccattatgagggttcacgcattcctg
gagcagtggggtctggtgaactaccaggtcgatgcagagagccgcccgagccccatgggt
cctccatcaacatcacacttccacgtgctggctgacaccccctcaggactgcagccgctc
aaccctcccaggactcaacagccttcagcagcgcagcagatgctgaacctggataaggcc
aaggaggagggtggcggtggcaaggacgaaggaggtggtatcccagcccgtggtggcgct
gcaaatgccacgaccatcgggggtgatgccctaggcctcaagatggaccagtatgccaag
aagcaggcgtacctgcgccacaaggcggccgccacggtgtcgcgcgagtggactgagcag
gagaccctgctgctgctggaggccctggagatgtaccgcgaggactggaacaaggtgtgc
gagcacgtgggcagccgcacccaggatgagtgcatcctgcacttcctcaggctgcccatc
gaggacccctacctggacgaccccgccgcaggaggaggcgccctgggacccttggccttc
caaccaattcctttctccaaggcgggcaaccccattatgtctactgttgctttcctggct
tcggtggttgatcctcgtgtggcgtcttcggcagccaaggcagcaatggaggaatttgcc
aagatcaaggatgaggttccctcggcccttctggatgcacacatcaagaacgttgagact
gcagcggcggagggcaatgtcaaccctaaggcaggcctaggcatgactggcattgcaggc
acaggtgacaaggagccgcaggagggcacagccgagccgtcgactggagaggagtcggaa
aaggcagaagaaggcaaggaaggtacagagccctcgctgtctgcagctgaggtcaagttg
gaaaagcccagcagttccgaggagaattcctctgcctcggctgaaggggccccttctgct
gcctccagcactggtgctgtggccacccccactggaggagcaggaggagagtccgaggac
aaggcaaaagcggccaagcttgccgaggagccttccaaagagagccctgctgctccagac
caggagtccacggaggaacccaaggcaccggagaccgaccgtgaccggcttgtcaaggac
gcacaactctccacggcggctgcggcagctctgggtgcagcagctgtcaaggcaaagcac
ctggcagctgtggaagaacgcaaaatcaagtccctcgtggctcttctggttgaaactcag
atgaagaagctggagattaaactaagacacttcgaggaactggaagccatcatggatcga
gagagggaaacgctggagtaccagcggcagcagctgatccaggagcggcagcagtttcat
ctcgagcagctgcgagccgccgagtttcgggcccggcagcaggcgcacgccatgatgatg
gctcagcaaggcggcaccacagcgtcgcagcccgcagcagctcccacgccccctggtgct
ccacctgcagctccgcctcctgcggcggccggaggaggagtccccacgccagacggagga
ggagatccaggtcagcacccaccgcgaactggcagtggccctcccctaccttccccacac
ccacagcaacagcagcagttaccaccgcagcagcagcgtagcccttactacccaggctac
ggatctgccccgcctccggtgggcggggcaccccggccgttcccacccacagggggtggg
cccccggccgttggttacggggccgctccctacccgcaacccggcggcgagcaggcattc
cgaatgccccttggcagcagccctcagccggggggagtgggtggagtgcgaagcccaggc
atgatgcaccaatcttcggcacctcctcccacctcttccatgggacagcaacatccatca
ggctcctatcggcaacattcctccagcatattctcggggcacccgttctaa
DBGET
integrated database retrieval system
