Rhipicephalus sanguineus (brown dog tick): 119394273
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Entry
119394273 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: intermembrane lipid transfer protein Vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsan04131
]
119394273
Membrane trafficking [BR:
rsan04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119394273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
119394273
NCBI-ProteinID:
XP_037517483
LinkDB
All DBs
Position
5:138516139..138707490
Genome browser
AA seq
3219 aa
AA seq
DB search
MVFESVAVELVNYVLGDYIENLDTSQLKLGIWGGDINLKDLDIKQSAIDDLDLPFRVAYG
HIEKLTLKIPWQSLYNSTYSAAVEGIYMVIIPKSGVKYDAAKEHKLQREAKQRELARIEL
VKQQEAEKDKPKEEKQDTFVEKLAAQIIKNLQIRIRNIHIRYEDNFTIPEHPFSFGITLY
NLSFDTTNEEWEPCVLDVSARIVHKLVDISSFGLYWNTDCKLFMEYEQSKIKARLQETIS
NETVRPNEVLYMLGPISSLAKLTMDTKPEINNYSSTGVLDILIAEISIGIGKRQFQDMLA
LADSVNRMTIAAHFRKYRPDVPVHNHAKYDAGLKWHFAYEAILEEYVRRRRRNWSLKHMH
EHVLKVREYKDQYKXKLQTKQSSESLKVLEDELDVFNITLARRQAELEVEEQLLNTPKQS
WLSSWWFGSSDQTSAASTTQDIAKKFEKAMTPEEKEKLYAAIGYQENTSAPIYPVTYVAK
RLNFVLKNFSLAIHDEARAKTIIVQAILNDMSATVEERPRTEAMKLESKIEKFKVLGFPQ
EPSDFCTLISSEIVQDNEKKTLRPLFETNPIDEKCDQRVHLFAEPVEMVYDATVISALVD
VFSPPEQATLDKLQAQAVSKLNDIKAMSATGLQHAIEQRKALEVLVDLKPSYLVIHEGGR
KKDNKLLLVISFGQLYVHGLPRSRKAPTVRDLVKSGSTESEVMQVMISQAYEKYTIRVTA
TEVVVCPPGKEWKSVLRSSNSELHVLQPTDVLVDIDKCIIADNVRLPKVRVTGKLPLLRV
SVTDFKLVQVLKVLNSIPTVGASTPPKVVEAAPVVSLPEVDLPTKIETTTALNVVPKGDS
SSSEGSAPRQDYDATDLELDFEITEVALDISQIIKGVLKPVVLFQAQQLSLKFESRPLDW
RCQLRLKKTILEHMDFSAPNRPGPLKILDSTADPDTGSTISLVILQTNKKHPEFESLRGS
TLQKVTLDISELMLIMHEESICALVTLYTQLNEELGTMEKETKVSESQIQATTAAKPLGS
KPSSTGIKKSSSNVIISMDLFASLTGFALEICNKNRTICDILVRGMEYGMTWYPNKLVTR
LNLKTVGIGDPTPGTLHKNIIAVPGGEVVAFEITTYEECGALGYVEMDRVDIAIKGTLGR
LHFVFLYRFYLDIYNFVNRFQAAKAKIMEATANMAEAARASVETAYKQAYKMALDIRIEA
PIICLPQNCKSRNIVVMDFGVLRVSNKFKLDKVSTPESPCLMEEMVVAFDDLKLSRFSMK
EPPADDGVEHPLLLPVSFNLLVTRNMNFEAHPEVPEMKNEGVLPRIELILSQEDYCAIMR
TLDENLNEIPPEDEPLDWSKIPVPIVTNAPYTVPEDKYSHEHTDPVLTTEKEIKRAVRID
LAFQIDCVVLDLYMKRTDEVKEGLARLEIELLSLKGHMFHDGSYWMDTLLGNLIVDDTRV
TRKSGLTRFLTRSSRSKDKLVDILYKVDKNGDFFTQIDLSKITFVYCVDFFNAIMSFYYM
DDMYKKADEKRKQLQQQAAKRQQQQQPQLQASVTETTSPPMPPYPVRNYTVQLEMDKPDI
VLVANIDDPQSACIILKGSIHQKLRQVGTTQTMMVVMDDLRMFTSYVDKFQSEHVRSEIL
KPTEISLNSTFTVENGQHMEINFSPIEIHVTPGAVEILSKSLGSLSAPSAEQKADHEVEP
DNSEVWNPMSLDKTKLWFLEGPTVPMAVEAMETMETVPASQDSQPPRKDEQALVTAKSLV
ITLEQGAENRTVPMLLWKASLEAEVLDWSGEMSVRGFLGSVVFYYNEKLAVWEPLVEPIE
VPGGRKVWEIALKVDKHIADDSAHDAANLPPMFSIELLVEDTLEVTISQTTLQVLKDLGE
AFSAALVKTPVEHKRLDAPYVVKNYLGIVVHVILEGTPFRVAAPNVDDDIDEVILEPDAM
VQLTFKETSENKGGRFTGTLVELSQQNVTEAHFAIQLKETGVSAVRKVCVTYADKRYFRL
PIKTYPGDDWAFIVDTTSHYGSKLVMIYSVCKVVNHLSVPIEVYYLVEGEKISEVFLCGV
IEPHKVLHLPVRALYTKTNELFFKPVGEKYRMSVEPFIWKPSGIDHAHNIVLQCPSKTEK
NKFFYINVCGKVEPVKFDESIGKTSTMPLYSIELQPTVLVRNLLSCSLYVKLENMSRLFC
LEAGQGVELWNAEVGESTLLLQLLGYRDMEWSCKKLLEANMDELSVLTFETKEGPQMDLG
MHVETTNNCIVLGLYCPFWMVNKTTVDIAYKPGEDRRMSLIPQSSFETELSPGKTEDSAG
INHPANFDGPVLFSYRSKTLFTKKKAAIKIFNSEWSERFSLDAVGSSGTIIAKSKDGYSY
LLSVGITLSATGLTRIVTFTPYYLVLNNCKTAVEIKEYAENSVWMKILPGACVPFWPKEV
QKLELLARYADTEECTVPFSCKETNSILLRLANKKGGLYMACQVGESAAVMSFGDYEDGL
SPVFLVNQSSVALTYCQYGYRDMCLNSLPPKTAQHYTWDNPMAKRCLLWGSDSCTKLNKL
ELLMDDCDQVQLKDDRKLFWIAFLNGRQRTLLFTEDSALVFKIQESGALERNIYDMVLNF
QAVGISLVSSHPRREIVYISVIGSGVKWESKKETKTYYKAVNAKESNQLELQYQRYNNLR
RLDRDPASVLMVNGYEVNFKEMKILSNPKKDLRRLARPGIWATYKKSLHQTMIHAKLHIL
QVDDQIADCTFPVILTPVTMRRSLGEGMIPKPFFETSVIMRQFDYSQVRQFKYFKVLVQE
FHARVDQCFINAIGEFLTLNEREANHEELLEKDMQLTKGGLKEIAEQFSEQGVKDFFDML
HFSPIKLHLSFSLSADSKNHSGGSLFNLLLQSFGVTFTEIQDAVLKLDYFEKSNTYLTMH
QLIHEASSHYFRQTLKQIYVVVLGLDVIGNPVGLLTGFTTGVGDFFYEPLQGAIQGPEEF
AEGLATGVRSLIGHTVGGAAGAVSRITGTLGKGIAALTMDEDYQRRRRLEQNRRPNDIAE
GIAQGGRDLVMGVYEGVTGIVTKPVAGAREEGVSGFFKGIGKGLIGAVARPTGGVVDFAS
GSFDAVKRATDVVDEVRPVRPARFIRPDGIIRPYNLMEAQGNRLLQDVDKGKYAETDVYV
AHVNICEEGRNILLVTNRRVMFVLKGDVFGQWNAEWTYSWEEVKEPPTVTSQGIKILLKE
PKKKALFGSKETGKIIHIKDMDVARFIAQKIEDAMKKPL
NT seq
9660 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagtcggtggctgtcgagctcgtgaactacgttctcggagactacatcgag
aacttggacacgtcccaactcaagctaggaatatggggaggagacatcaatttgaaagat
ctggacatcaagcaaagtgccattgatgaccttgatctacctttccgtgttgcatatggt
cacatagaaaagctcacattgaagataccatggcagtcattgtacaactctacttattct
gcggcagtggaaggcatctacatggtcataattccaaagtcaggagtgaaatacgatgcg
gccaaggagcacaagcttcagcgggaagcaaagcaacgggaacttgctcgaatcgagctt
gtcaaacagcaagaggcagagaaagacaaaccgaaggaggagaagcaggacacattcgtt
gagaagttggcggcgcagatcatcaagaacctgcagatccgcatccgcaacatccacatc
cgttacgaggacaacttcaccattcccgagcacccattctcctttggcatcaccctctac
aacctgtcctttgacacgaccaacgaggagtgggagccctgtgtcctcgacgtgtctgcc
aggattgtgcacaagctggtcgacatcagcagctttggcttgtattggaacacagactgc
aagcttttcatggaatatgaacagtcaaagataaaggcacgtctgcaagaaacaatcagc
aatgaaactgtcaggcctaatgaggttttatacatgctcggtccgatttcctcgcttgcc
aagttgaccatggacactaagccagagataaacaactacagcagcactggggtcttggac
attctcattgcagaaatcagcatcggcatcggcaagcgccagtttcaagacatgctggcc
ctcgcggattcggtcaatcggatgacgattgccgcccacttcaggaagtacaggcctgat
gtcccggtgcacaaccatgctaaatatgatgctggcttgaagtggcactttgcatatgaa
gcgattctggaggagtacgtgagacggcgtaggcgtaactggtcgctgaagcacatgcat
gagcacgtcctcaaggtcagggaatacaaggaccagtacaaantcaagctgcaaaccaag
cagtcttccgaaagcctcaaggtgcttgaagacgagttggacgtgttcaacattacactt
gcacgacgtcaggcagagctagaggttgaggagcagctactgaacacccccaagcaaagt
tggttgtcatcctggtggttcggtagtagcgaccagaccagtgcagcgtctacgacccaa
gacattgctaagaagtttgagaaagccatgacgcctgaggaaaaagagaagctgtatgct
gctattggctaccaggagaacacttcagcaccaatctacccggtcacctacgtcgccaag
aggctgaattttgtgctgaagaacttttcattggccatacatgatgaagcgagagcgaag
accatcatcgtgcaggcaatcctgaacgacatgtcggcaactgtcgaggagaggcctaga
acagaagccatgaagctggagtcgaaaatagagaaatttaaggttcttggctttcctcaa
gagccgtcggatttctgcacgctcatctcgtctgagattgttcaagacaacgaaaagaag
actctgcgtcctttgttcgaaacaaatccaattgacgagaagtgtgaccagagggttcac
cttttcgcagaacccgtggagatggtgtacgatgcgactgtcatctctgccctggtggat
gttttcagccccccagagcaggctactcttgacaagttgcaggcacaggcagtatcgaag
ctgaacgacatcaaggccatgtcggccactgggctacagcatgctatcgagcagcggaaa
gctcttgaagtgctggttgatctgaagccgtcctacctcgtcatccacgaaggtggtcgg
aagaaagacaacaagctccttttggtgatcagctttggtcagctctatgttcacggcttg
ccgaggagtcgcaaggcgcctacagtgcgcgacctggtcaagtctggaagcaccgagtct
gaagtgatgcaggtgatgatatcccaagcgtatgaaaaatacaccatacgagtgacggcc
actgaagtggtggtgtgccctccaggcaaggagtggaagtctgtgcttaggagcagcaac
tctgagctgcacgtcctgcagcccacggatgttttagtggacatcgataagtgcatcatc
gccgacaacgtccgcttgccaaaagttagagtaactggaaagctgccgctgctgcgcgtg
tcagtcaccgacttcaagctggtgcaagtactgaaggtcttgaacagtatccccacggtt
ggtgccagcacgccccccaaagttgtggaagcagctcctgtcgtctcgttacctgaagtt
gatcttccaacaaagattgagacgaccactgctttgaacgtggttcccaagggagattcg
tcaagcagtgaaggaagcgcgccacggcaagattacgatgcaactgacctggaattggac
ttcgaaataaccgaggtggccctggatatctcgcagataataaagggagttctgaaacca
gtggtgctcttccaagcgcagcagctgagcctgaagtttgaatctcggccactggattgg
cgctgccaattgcgcctcaagaagaccattctggagcacatggatttcagcgctcccaac
cgccctgggccactgaaaattctcgactctaccgctgaccctgatacgggaagcacaatc
agcctcgtaattctgcagacaaacaagaagcacccagaatttgaatctttgagaggctca
acactgcagaaggtgaccctggacatctctgaactgatgctgattatgcatgaggaatcc
atctgtgccctggtgacattgtacactcaattgaatgaagagctgggcaccatggagaag
gagaccaaggtttccgagagccaaattcaagccaccactgcagcgaaaccactcggcagc
aagccttcttctactggcatcaaaaaatcatcgagcaacgtgattattagcatggacctg
tttgcttcgttgactggtttcgccctggagatttgcaacaagaacaggaccatctgtgac
attcttgttcgaggcatggagtacggtatgacgtggtatccaaataagctcgtcacaagg
ctaaacctcaagacagtcggcattggcgatccgacacctggaacccttcataagaacata
attgctgtgcctggtggtgaagttgttgcttttgaaatcacaacttatgaggaatgcgga
gctttgggctatgtggaaatggatcgagtggacatcgctatcaaagggacattgggccgg
ctccactttgtgtttctgtaccgtttctacttggacatctataactttgtgaacaggttc
caggcagccaaagcgaagataatggaggccacggccaacatggctgaggccgcgcgtgcc
agtgtggagacggcctacaagcaggcttacaagatggcattggacatccgcatcgaggcg
cccatcatctgcctgccacagaactgcaagtcacgcaacattgtggtcatggattttggt
gtgctgcgcgtgagcaacaagttcaagctggacaaagttagcacacctgaatcgccttgc
ctcatggaagagatggtggtggcattcgacgacctcaagctgtcacggttcagcatgaag
gaaccacctgcagatgatggcgttgaacaccccctgctccttccagtatcattcaattta
cttgtcaccagaaacatgaactttgaggcccaccctgaagttccagaaatgaagaacgaa
ggcgtgctgccaaggatagagctgattctcagccaagaggactactgtgccataatgcga
acgctggacgagaacctgaacgagataccgcccgaagacgagcccctggattggtcaaag
ataccggtgccaattgtgaccaacgctccttacacggtaccggaagacaaatactcgcac
gagcacaccgacccagtcctaactacagagaaagagattaagagggccgtcaggatcgat
ctggccttccagattgactgcgttgttttggacctttacatgaagagaacagatgaggtg
aaagaaggcctggccagactggagattgagcttctctcactcaagggacacatgtttcac
gatgggtcgtactggatggacacattgctgggcaatcttattgtggacgacacgcgcgtt
acccgcaagagtggtctgaccaggttcctgacacgttcaagtcgcagcaaggacaagctg
gtggacattctgtacaaggtggacaagaacggggacttcttcacgcagatcgacttgtcc
aagatcacgtttgtctactgcgtcgacttcttcaatgccatcatgagcttctattacatg
gacgacatgtacaagaaggccgacgagaagcggaagcagctgcagcagcaagccgccaag
cggcaacaacagcagcagccccagctgcaggcatccgtcaccgagacaacctcaccaccc
atgcctccctatcctgtgaggaactacacagtgcagcttgagatggacaagccggacatc
gtccttgttgccaacattgatgatcctcagtctgcatgcattatcttgaaggggtctatc
caccagaagttaaggcaggttgggacaacacagacaatgatggtggtcatggacgacctc
aggatgttcacctcttacgtggacaaattccaatcggaacatgttcgctctgagatattg
aagccgacagagatcagcctgaacagcactttcaccgttgaaaatggccagcacatggag
atcaacttctcaccaatagagattcacgtgacacctggggcagtcgagattctgtccaag
agtttgggctctctcagcgctcctagtgctgagcagaaggctgatcacgaagttgagccc
gacaacagcgaagtgtggaacccgatgagcctggacaaaacgaagctgtggttcctggaa
gggccaactgtgccgatggctgtggaagccatggagaccatggaaacggtgcccgcctcg
caagattcccagccacctcggaaggacgagcaggctcttgtgactgccaagtccctcgtg
ataactctggaacaaggtgctgaaaaccgcacggttcccatgctgctgtggaaggcaagc
ctagaagctgaagtcttggactggtctggggagatgtcagttcgcggtttcttgggctct
gtggtcttctactacaatgagaagcttgctgtgtgggagcctctggtggagcccattgaa
gttcctggcggtcgcaaggtctgggagattgcacttaaggtcgacaagcacatagccgat
gacagcgcacatgatgcagccaacctgccgccaatgttctcaattgagctgctcgttgag
gacaccctggaggtgaccatttctcaaactacactgcaagtgctcaaggatctcggggag
gcgttcagtgctgccctagtcaaaacacccgtggagcacaaacgtttggatgcaccttac
gtggtcaagaactacctggggattgttgtccacgttattcttgagggaacaccgttccgt
gttgctgctcccaacgttgatgacgacattgatgaggtcatcctggagcccgatgccatg
gtgcaactgaccttcaaggagacctctgagaacaaggggggcaggttcacaggtaccctg
gtcgagcttagccaacagaacgtcacagaggcccactttgccatccagttaaaagaaact
ggtgtgtcagcggtacggaaagtatgcgtgacctatgcggacaagcgatacttcaggctg
cccatcaagacgtatcccggtgatgactgggcattcatcgtggacaccacatctcactac
ggctcgaagcttgtcatgatttactcagtctgcaaggtcgtaaaccacctgtctgtccca
atagaagtttactacttggttgaaggtgaaaaaatctccgaggtgttcctctgcggcgtc
atagaaccgcacaaagtcctccatctgcctgtgcgggcactctacaccaagaccaacgag
ctgttcttcaagccagtcggagaaaagtacaggatgtccgtggagccattcatttggaag
cccagcggcattgaccatgcacacaacattgttcttcagtgcccatcaaagacggaaaag
aacaagttcttttacataaatgtgtgtggaaaggtggagcctgtcaagtttgacgaaagc
attggcaagacttcgaccatgccattgtacagcattgagctccaaccaacggtgctggtg
cgaaacttgctttcctgcagtctttacgtcaaactggagaacatgtccaggttgttctgt
ctggaagctgggcagggagtggaactctggaatgctgaagttggagaatccacgcttctg
cttcagctgcttggttacagagacatggagtggtcctgcaaaaagctcttggaagctaac
atggatgaactatcagtgttaacttttgagactaaagaaggtccacaaatggacttgggc
atgcatgttgaaacaaccaacaactgtatagtattgggtctgtattgccctttctggatg
gtcaacaagaccactgtggacatcgcttacaagcctggagaagacagacgtatgtctcta
ataccgcaatcgtcttttgaaacggaactgagtccaggaaagacggaagattctgcggga
ataaaccatcctgctaatttcgatggcccagtcctgttctcctaccgttccaagacgctg
ttcacaaagaaaaaggctgccatcaagatcttcaactccgagtggtctgagcgattttct
ctagatgctgttggaagctcgggaaccataattgccaaatccaaggatggctactcctac
ctgctgagtgttgggattacactgagtgccactggcctgacaagaatcgtcaccttcacg
ccatactacctcgttctaaacaattgcaagactgccgtcgagatcaaggagtatgcggaa
aattctgtgtggatgaaaatactgcctggtgcttgcgtaccattctggcccaaagaagtg
cagaagctcgagctcttggcgaggtatgcggacacagaagagtgcacggtgcccttctcg
tgcaaggagaccaactccattctcctcagacttgcaaacaagaagggcggcttgtacatg
gcttgccaggttggcgagagcgcagccgtcatgagcttcggcgactacgaagacggactg
tcgcccgtctttctggtgaaccagagcagcgtggcactgacctactgccagtacggctac
agggacatgtgcttgaactccctgccacccaagaccgcccagcactacacctgggacaac
ccgatggccaagcgctgccttctgtggggctcggacagctgtaccaagctgaacaagctt
gagctgctaatggacgactgtgaccaagtccagctgaaggatgaccgcaagctgttctgg
attgcattcttgaatggcaggcagcgaacgctactcttcactgaagactctgccctcgta
ttcaagatacaagagtctggtgcattggagcggaatatctacgacatggtgctgaacttt
caagctgttggcatctccctggtttcttcacaccccaggagagagattgtctacatctcc
gtcataggttccggtgtgaagtgggagtccaagaaggagaccaagacctattacaaggct
gtaaacgccaaggagtcgaaccagttggagttgcagtaccagcgatacaacaatctgcgc
cgtctagacagggaccctgcctcggtgctcatggtcaatggctacgaggtgaacttcaag
gagatgaagattctttcaaaccccaagaaagacttgcggcgccttgccaggccaggcatt
tgggctacatacaagaagtcgctacaccagactatgattcacgccaagctccacatactt
caggttgatgaccagattgcagattgcactttccctgtgatattgactcctgtcacgatg
aggaggtccctgggagagggcatgattcccaagcccttctttgagaccagtgtgataatg
cgacagttcgactactcacaagttcgtcaattcaagtacttcaaagttctggttcaggag
ttccacgccagggtggaccaatgctttatcaatgctattggtgaattcctcaccctgaat
gagagggaagccaaccatgaggaactacttgagaaagacatgcagctgaccaaaggtggc
ctcaaggaaattgctgagcagttctccgagcaaggcgtcaaggacttctttgacatgctt
cacttttcaccaatcaaacttcacttgagcttttcactgtcggccgacagcaagaaccac
agtggtggaagcctcttcaatcttcttctgcagagcttcggggttaccttcaccgagata
caggatgctgttctcaagctggactactttgagaagagcaacacgtacttgaccatgcac
cagctgatacatgaggcctcctctcactacttccgtcagaccttgaagcaaatctatgtg
gtggtgctggggctggacgtgataggcaaccccgttggccttctgacgggattcaccact
ggcgtcggagacttcttctacgagccgctgcagggcgccattcagggtcccgaggaattc
gcggagggtcttgccactggcgttcgcagcctcattggacacactgttggtggtgctgca
ggggcggtgtcccgcatcacaggcactcttggaaagggcattgcagccctgacgatggac
gaagactaccagcgtcgccgcaggttggagcagaaccgccgccccaacgacattgccgag
ggcattgcgcagggcggaagggacctggtcatgggtgtctacgaaggcgtgactggcata
gttacgaagccagtggcaggcgcaagagaggaaggcgtcagtggcttcttcaagggcatt
ggcaagggcctcatcggcgcagtggccaggcctactggtggagttgtggattttgccagt
ggctccttcgatgctgtcaaaagggctacggatgtcgtggatgaagtccggcctgttcgt
ccagcacgattcattaggccggacggaatcatcaggccttacaaccttatggaagcgcaa
ggcaacaggctcctacaggacgttgacaagggaaagtacgcggagacggatgtgtacgtc
gcccacgtcaacatctgcgaagaaggccggaacatcttgcttgtcacaaacaggcgggta
atgtttgtgctgaaaggcgacgtgttcggccagtggaatgcggagtggacgtattcctgg
gaggaagtgaaggagccgccgaccgtcacaagccagggcatcaagatcctgctgaaggag
ccaaagaagaaggctctcttcggctccaaggagactgggaagatcatccacatcaaggac
atggacgtggccagattcattgcacagaagatcgaggacgcgatgaagaagcccttgtaa
DBGET
integrated database retrieval system
