Rhipicephalus sanguineus (brown dog tick): 119395934
Help
Entry
119395934 CDS
T07382
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119395934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119395934
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119395934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
119395934
NCBI-ProteinID:
XP_037518893
LinkDB
All DBs
Position
6:complement(79790058..79898590)
Genome browser
AA seq
864 aa
AA seq
DB search
MAELLPNVDIAEVEKDPGFLKYLKSLPEKPATTFRFFDRNDYYTVHGPDAEYVCREMYRS
MSALKYLGSGDSRVASVCVSQRSYENLLSELLLVKHYRVEVYRNTAARGSASWTLAIQAS
PGNLAPLEDVLFGGASGGLSQSKGVLAVSVHTNQQTLGIAYGDAVLQQLTVAEFVDDEHF
SNLSTVLAQLSPQECLLSATDAKRCPELKALLERSGALVNETKTGDFNSKEIAQDLSCLL
QPSQLPQGQANMLPELDLKVAMDALAAVIKFLNLTSCAEHLGCLRLCTFEFGQFVRLNNA
AIRALAVLPADGEGSKAASEPSLLRLLNRCRTAGGQRMLSQWLRQPLCDLNRIEERLDLV
SLLVDDFELRQSLHEQMLRQFPDLLRLSRKLHKQRVSLQELYKTYQCLQVLPKLREALTK
ASETHKSPLLGAIFAAPIQDLEGDFSKFLEMVETTLDFEAIEQGDYLVKPEFDDELRALH
EELEKVKGECEGYLRKAAKDLGLEAAKTIKLETSKDLGYYFRVTRKEEPALRSRKGYTTI
DTKQNGVRFRSGPLTEANERFLGSRKAYDQAQEGIAKMIVEIAAGYWEPLQQLSEIISHL
DVLVGFAVAAVSAAGKPFVRPTMRPKGSGVIHMTALRHPLVEAQGDVLFIPNDVDMRKGS
SSCYIITGPNMGGKSTYIRSVALAVLMAQVGSFVPCDSAELTIVDAVLTRIGAGDQQLKG
VSTFMAEMLESAHILRNATADSLVVIDELGRGTSTYDGYGLAWAISEQLAKGVDAFCLFA
THFHELTELATEVPCVHNVHVTADVSEDSFILLYKVKPGVCSQSFGIEVAKLAHFPEHVL
KEARQVLSQYEAATAKMEETDMEH
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgttgccgaacgttgacatcgcggaggtagaaaaagaccccggctttctc
aagtatctgaagtccttgccagagaaacctgcgacaacattccgtttctttgacagaaat
gactactacacagttcatggtccagatgcagagtatgtctgccgggaaatgtaccgtagc
atgtcagcactcaaatacctcggctcaggcgactcacgggtggcatccgtgtgtgtgagc
caacgcagctacgaaaacctgctgtctgagctgctgctcgtcaagcactaccgtgttgag
gtgtaccgaaacacagctgcacgtggttccgcttcctggaccctcgctatacaggcatct
cctggcaacctggcacctctggaggacgtcctgtttggaggtgccagtggtggcctttca
cagtccaaaggagtgttggctgtctctgtgcatacaaaccaacaaaccctgggcatcgcc
tacggagacgccgtcctgcagcagctgactgttgcggagtttgtggacgacgagcatttt
tcgaacctcagtactgttctggcccagctgagtccacaagagtgcctgctgtcagccaca
gatgcgaagcgatgtcccgagttgaaggccctcttagagcgctctggggccctcgtcaat
gagacgaagacaggtgatttcaactccaaagaaattgcccaagacctgagctgtttgttg
cagccatcccagctgccgcaggggcaggcaaacatgctgcctgaactggatctgaaggtg
gccatggacgctttggcagcagtaataaagttcctcaatctgacatcgtgtgctgagcac
ctgggttgccttcggctttgcacatttgaatttggccagtttgtgcgcctcaacaatgca
gccatccgagccctggctgtgctgcctgctgacggggaaggtagcaaggcagcctccgaa
ccgagcctcctgcgtttgctgaatcggtgccgcacggcaggcggccagcgaatgttgagc
cagtggttgcgacagccactctgtgacctcaatcgcattgaggagcgactggacctcgtg
tccctgctcgtcgatgactttgagctgcgacaaagccttcacgaacagatgctgcggcag
ttccccgacctcttgaggctgtcgcgtaagctccacaaacagcgagtctccctgcaggag
ctgtacaagacttatcagtgcctgcaagttctgcctaaattgcgagaggctttgaccaag
gcgtccgagacgcacaagtcgccgctccttggtgcaatttttgctgcgccaatacaggac
ctggagggagatttcagtaagttcttagagatggtggagaccacactggactttgaagct
atagagcaaggggactacctggtgaagccggagtttgacgacgagcttcgagcacttcat
gaggagttggagaaagtgaaaggtgaatgcgaaggctacctcagaaaggctgcgaaagac
cttggcctggaagctgccaagaccataaagctggaaacgagcaaggacctgggctactac
ttcagagtgacacgcaaggaggagccagcgttgcgttcacggaagggctacacgactatt
gacaccaagcagaatggagtgcgcttccgcagtggaccactgactgaagccaacgaacgc
tttctggggtcacggaaggcgtacgatcaggcccaggaaggaatcgccaaaatgatagtt
gaaatcgctgctggctactgggagcccctgcagcagctgtcggagatcatctctcacctc
gacgtcctggtcggctttgcagtcgcagcagtgtcggcagctggcaagccttttgtgcgg
ccgaccatgcggcccaaaggctcgggtgtgatacacatgacggctttgcgtcatcccttg
gtggaggcccagggtgatgtcctcttcatccccaatgatgtggatatgcgaaaaggttcc
agttcctgttacattatcacgggtccaaacatgggcggcaaatcgacctacatacgatca
gtggccctagcagtgctcatggctcaagtgggaagctttgtgccatgtgattctgccgag
ctgacgatagtggacgccgtgctgacacgcattggagctggtgaccagcagctcaagggt
gtgtctacatttatggccgagatgctggagtccgcacacatcctcaggaatgctacagcc
gacagcctggttgtcatcgacgaactgggtcggggcacgtccacgtatgacggctacggc
ttggcctgggcaatatcagagcagctggcaaagggggtggatgccttctgccttttcgcc
acccatttccacgagctgacagaactggcgacagaggtgccctgcgtccacaacgtccac
gtcacagccgatgtcagcgaagacagttttatactcctgtacaaggttaagccaggcgta
tgcagtcaaagctttggcatagaagttgccaaactggcacatttcccggagcatgtgctc
aaggaggccaggcaggttctatctcagtatgaagctgctacagcgaagatggaggaaaca
gatatggagcactga
DBGET
integrated database retrieval system
