Rhipicephalus sanguineus (brown dog tick): 119396947
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Entry
119396947 CDS
T07382
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119396947
03041 Spliceosome [BR:
rsan03041
]
119396947
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119396947
Spliceosome [BR:
rsan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119396947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119396947
NCBI-ProteinID:
XP_037520264
LinkDB
All DBs
Position
6:complement(162191119..162313814)
Genome browser
AA seq
1834 aa
AA seq
DB search
MEVVKAFNSELTSLYEGKPPISKAKMTAITKSAIKGIKFYKHIVQSVEKFVQKCRPEYKV
PGLYVVDSIVRQSRHQFGQEKDVFAPRFTKNIHNTFQHLFKCPVEDRPKIVRVLNLWQKN
QVFPPDVIQPLLDMASPAAVPGGEPAQSSDVVADTKANKNSMENWKSWNHGNSIQDSVHG
SGQETKTYALTQWLNQSEMPVPSKASEENLNLAMAAEAENAAPPDPELLVKLQSLASQLL
TNRPGSSSAPEEKPPSQQPAAPAVKFNKKLLDFDYGDEEEEEEEESFEETKTTDFVEPPL
EDSGGQSSEPNAIALSMAQNLLNNPELLKQLQQMQQTLQQQSSEALRAQEAASSSMQSPP
PASAAPVHSSLPTADPFAKPDGSSSQRLSSPGLPPLPQAPQPQTPNGSHAALQQTTQLAN
APALITPGYGGAPGAPVLPQVFQDTGALYPPVVAPMGSIGFGGAVEPPGGFVPLVAGPVS
ADEQPPTSTSMETSGTLPSYMSGGDLDERCGVVLGPGGRDMDLRTAAGGLPSPGRDRDRR
RHSRSRSPRRRGRSRSRSPSRASGNRYGSTTKGDRSRERETRESAREKERERERERRRKG
FPPVKKNCLSVCSATLWLGHVPKSVSEMDLHDTFGEFGTIVRIDMIPPRGCAYVCMDRRQ
DAFRALQKLKNLKLQGSLIKMAWAPGKGVKGKELKDFWEVDLGVSYIPLDKLPADVNLQA
LEEGGVIDKDSLSDGLKEKYAEQERQRGMADPLAPMMLDLVQQQQQAPPSAEAMMAVAFP
PAVAAPGAPTAVAMVPPPVPQFSIPLPPVGQGSVKTNEAQIKSACMMPSQSLVMPQIQLP
MGVPPPPNHMLMVPPNTSQTLLGPSALGLIPPPLSLPGTALGLPPLHPPMSLPVTSQAAV
MPIVTTASPATSSAPATTVTQPPAAAAPAVASSATPVAESETTDVPMAIDGDATPTDEDG
TSEASRLGMIHPPSGEPVGNDKGPVENVKPAGSDLGAAAPPGGFLPLSAPPGMPGQFGNH
GLLAKDKVDAGSVKEPKSPVAVSSHEAPSTDVKTEQSEKTDPEKMQRDEQSSGQQVAEPG
QEACAFDPTVSSSIPLPVGLPGMPSPPVPPRPFGSAPVRFSGPPMFPFENPADGRPGMEF
PGSRMMGPDPRMMVPPVGDFRPPNPHDQAIMGGPGEQRMLGGPLEQHMLDGPPEANMMGG
LMEHRMHRGPEPRMMGGPREPRMMSGPMMGGPPEPRMMGGPEELRMLGGPPEHRMMGGPR
DHRMIGGPMQEPRMMGGPPDHRMMGGPPPDHRMMGGPPPGHRMMGGPPPDHRMMGGPPDH
RLMGGPPPDHRMMGGPPDHRMMGGPPPDHRMMGGPPDHRMMVGPPDHRMMGGPPDHRMMG
GPPDHRILPGPPDHRMLRPPDFRLGGPPQDIRNLGPPEPRMPAPGLRMLAPNMPPNMPPN
MPPNMPPNMPPNMPSNMPPNMPPNMPPNIPPNMPPVIGAGVTDGKQPEVKGPESQEDAQN
KSAELADKKRSENGEASKEWKPPASAPEPSRGPNGPATEEGQGNGEQPWKQPGGFGFFGP
PRSRFNEPSSGRDSDEGGFGGERGDRRVFTNAYGESSDRRRSSGRERRSRWSREDEERDR
ERSRSERSERDRSDRDRSDRRDRDRSKDRSDRDRDRERDRDRERSDRDRDRSDRDRSDRD
RSDKDRDRSDRDRDRSDRSDRDRDRDRDRDRDRDRDRDRDRDRDRSDRDRGDRDRSDKER
GDRSDRSRGDHSRSRDRERSSNRSHSSPERAATATAETNGEVSSSKPNGGSSTAEVPLPN
VESKGPASNVESKGLAEPEAPKEAAEHAKPEVKA
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtcaaagccttcaacagcgagcttacctcgctgtatgaaggcaaacctccg
atctctaaagccaagatgacagcgatcacgaaatctgcaatcaaaggaatcaaattctac
aagcacattgttcagagtgtcgagaagtttgttcaaaagtgtcggccagagtacaaggtg
ccaggactgtatgttgtggattcaatcgtgcgccaatcacggcatcagtttgggcaggag
aaggatgtattcgcaccacggttcacgaaaaacatccacaacacatttcagcaccttttc
aagtgtccagttgaggacaggccaaagattgttcgggtacttaacttgtggcagaagaac
caagtgttcccgcctgatgtcatccagccactcttggatatggccagtccagcagccgtt
ccaggaggggagcctgctcagagctcagacgtggtagccgataccaaggcgaacaagaat
tccatggaaaattggaagagctggaatcatggcaacagcatccaggactctgtgcacgga
agtggccaggaaaccaagacctatgccctcacgcagtggctcaaccagagcgaaatgcct
gtgcccagcaaggcatcagaagagaacttgaacttggccatggcagctgaggcagaaaat
gcagcccctcctgacccggaacttttagtaaaacttcagagccttgcttcccagctgctg
acaaacaggcctggtagttcatcagctcctgaagaaaagccaccaagtcaacagccagca
gcccctgctgtaaagttcaacaagaagctgctagatttcgactatggtgacgaagaagag
gaagaggaagaagagtcctttgaagaaaccaagactactgattttgttgagccacctttg
gaagactctggtggtcagtcttcggagcccaatgccattgctctaagcatggcccagaat
cttctcaacaaccctgagctgctaaagcagctgcagcaaatgcagcaaacgttgcagcag
cagtcgtcagaggctctgcgggcccaggaggctgcctcctctagcatgcagtccccacca
ccggcttcggctgctcccgtgcactcctccctgcctactgctgacccctttgcgaaaccc
gatgggagcagcagccagcggctatcatcaccaggtttgccgccactgccccaagcaccc
cagccgcagacacccaacggcagccatgctgctttgcagcagaccacccagctggccaat
gcacctgcccttatcacaccaggttatggtggtgcaccaggagcacctgtgcttccgcag
gtatttcaggacactggggctctgtaccctccggtggtggcacctatgggtagcattggc
tttggtggagcggtagaacctcccgggggctttgtgcccctagttgctggtcctgtatct
gctgatgagcaacctcccacatcgacatccatggagaccagcgggacattaccatcatac
atgagcggtggggacttggatgagcggtgtggggttgtcctcggccccggaggccgtgat
atggacctccgtacagcagcaggaggcctgccctcgccaggacgtgacagggacaggcga
aggcacagccgttcccggtcaccaaggaggcgtggccgctcccgttctcgatcaccttct
cgtgcttctggcaatcgctatggtagcacaaccaagggggaccgctcgagggaacgggag
accagggaaagtgccagagaaaaagagagagaacgtgagagggagcggcgtcggaaagga
ttcccacctgtgaagaaaaactgccttagtgtttgcagtgctaccctgtggcttggacat
gttccaaagtcggtgtcagaaatggacttgcacgacacctttggtgaattcggcaccata
gtcaggattgatatgatccctcctcgtggctgtgcctatgtgtgcatggaccgcaggcaa
gatgcctttagggcattgcaaaaactgaagaatctgaagctgcagggaagcctcatcaag
atggcatgggcaccggggaaaggtgtgaagggcaaagaactgaaagacttctgggaggtg
gacctaggtgtgagctacattccacttgacaagctgcctgcggatgtcaacttgcaggct
ttggaagagggcggtgtaattgacaaggactccctgtctgacggcctaaaagagaaatat
gccgaacaggaaaggcaacgcggcatggctgatccacttgctcctatgatgctcgacttg
gtacagcagcaacaacaggcaccgccgtcagcagaagccatgatggcagtagcattccca
ccagcggtagctgcaccaggggcccccacagctgtggccatggtgcctccgcctgtgcct
cagttcagcatcccattgccaccagtgggccaagggtctgttaagacgaacgaagcgcaa
attaagagtgcatgtatgatgccctcccagagcctggtaatgcctcaaattcaactgccc
atgggtgtgcctcctccacctaaccacatgctgatggtgccaccaaacacttctcaaaca
ctgttggggcctagtgctctggggctgattcctccacccttaagcctgcctgggactgct
cttggcctgcccccccttcatcctcctatgagcctccctgtcacctcccaagcagcagtg
atgcccattgtcaccacagcaagtccagctacttctagtgctcctgcgacaactgtaact
cagccacctgcagcagcagcacctgctgtagcatcttctgcaacacctgtcgcagaaagt
gagacaactgatgtacccatggccattgacggtgatgccacgcccactgatgaagatggc
acaagtgaagcaagtcgccttggtatgatccaccctccttctggggaaccagtgggcaac
gataagggacctgttgagaatgtaaaacctgctggaagcgatttaggagcggctgctccc
cctggtggatttttgcctctatctgcaccacctggcatgccaggtcagtttgggaaccat
ggtctgctggcaaaggacaaagttgatgctggctcagtcaaggaaccaaaatctccggtg
gctgtatctagtcatgaagcaccaagtacagatgtcaagactgaacaatctgagaaaact
gatcctgaaaagatgcagcgggatgaacaaagttcagggcagcaggttgctgagccagga
caggaggcttgtgcttttgatcccacagtaagctcatcgatcccattgcctgttggactg
cctggaatgccttcaccgcctgttccacccagaccatttggaagtgcacctgtacgtttc
agcggaccacctatgtttccctttgagaacccagctgatggaagacctggcatggaattc
cctggttctcgtatgatgggccctgatccaagaatgatggttcccccagtgggcgatttc
cgtccgcccaatccacatgatcaggccatcatgggtggaccaggggagcagaggatgttg
ggtggccctctggaacagcatatgcttgatggacctccagaagcaaatatgatgggcggt
ctcatggaacacagaatgcacagaggtcctgagccgagaatgatgggaggtccacgagag
ccgcgaatgatgagtggcccaatgatgggaggaccacctgagccaaggatgatgggtggt
ccagaggaactacggatgttaggtggccctccagagcaccgaatgatgggtggtccacgt
gatcacaggatgattggtggtccaatgcaagagcctagaatgatgggagggcctcctgac
cacaggatgatgggaggcccacctccagaccataggatgatgggaggcccgcctcccggc
catagaatgatgggaggcccacctccagaccacagaatgatgggtggtcctccagaccat
aggttaatgggaggtcctcctccagaccataggatgatgggtgggccccccgaccacaga
atgatgggaggcccgcctcctgaccatagaatgatgggaggccctccagatcatcggatg
atggttggcccaccggaccacagaatgatgggaggtcctccagatcataggatgatgggt
gggccaccagaccacagaatactgccagggccaccagaccataggatgctcaggccgccc
gactttagattaggtggtcctcctcaagatataagaaatttggggcccccagaacctcga
atgccggcacccggtctccgcatgctggctcctaacatgcccccaaatatgcccccaaat
atgcccccaaatatgcctccaaatatgcctccaaacatgccttcaaatatgcctcctaac
atgcctcctaacatgcctcctaacattcctcctaacatgccacctgtgattggggccgga
gtcacagacgggaagcaacccgaagtaaaaggacctgaaagtcaagaagacgcacaaaac
aagtccgccgagttggctgacaagaagaggagcgaaaacggagaagcgtcgaaggaatgg
aaacctccggcttccgcgccggagccatctagaggaccgaatgggccagcaacagaagag
gggcaaggcaacggcgagcagccgtggaagcagcccgggggtttcggttttttcgggcct
cctcggtcgaggtttaacgagccaagctctggaagagacagtgacgagggcggattcgga
ggcgagagaggcgaccggcgtgtcttcacaaatgcgtatggtgagtcttccgataggcga
cgaagcagtggccgcgagcgaagaagccgctggtcgcgagaagacgaagagcgtgaccgt
gaacggtcacggtcggagcgcagtgagcgagaccgcagtgaccgggaccggagcgaccgt
agggaccgggaccgcagcaaagaccgcagcgacagggatcgcgacagagaacgagatcgc
gaccgagagaggagcgaccgcgacagggaccgtagcgaccgcgatcggagtgatcgggac
aggagcgacaaggatcgggaccgtagcgatcgggacagagaccggagcgaccgcagcgat
agggaccgtgatcgcgaccgggaccgggatcgggatcgcgacagagatcgtgatcgggac
cgtgaccgagacaggagtgaccgcgaccgaggagacagggatcggagcgacaaggagcgc
ggtgacaggagtgatcgaagcagaggggaccatagccgaagtcgagaccgtgagcggagc
tcaaatcgaagccacagctcgccggagcgggctgccactgcaacggcggagacgaacggc
gaagtgagcagcagcaagccgaatggtgggagcagcactgcggaagtgcctttgccgaat
gtggaatccaagggccccgcctccaatgtggaatccaagggccttgccgagccggaagca
cccaaggaagctgcggaacacgcgaagcccgaggtgaaggcgtga
DBGET
integrated database retrieval system
