Rhipicephalus sanguineus (brown dog tick): 119397255
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Entry
119397255 CDS
T07382
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan04382
Cornified envelope formation
rsan04512
ECM-receptor interaction
rsan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119397255
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119397255
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119397255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsan04147
]
119397255
00536 Glycosaminoglycan binding proteins [BR:
rsan00536
]
119397255
Exosome [BR:
rsan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119397255
Glycosaminoglycan binding proteins [BR:
rsan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119397255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119397255
NCBI-ProteinID:
XP_037520617
LinkDB
All DBs
Position
1:complement(123716870..123775527)
Genome browser
AA seq
1795 aa
AA seq
DB search
MVSSGLAQRLLLLSTLALCFYSALSSNYPAEYREFYRDPSRYNRTGWNNGRDQGGVRRGG
YNGYAEQRNCSSCSGCRCIGEKGSRGTPGLSGPPGPPGIQGHPGPEGLPGDKGEKGEAGR
DGPRGPKGERGKMGMPGFPGINGIPGIPGSPGSRGTPGLDGCNGTKGDPGPVGPLGPHGP
PGDPGPPGPPGPRGEPAYGPPGTKGEKGDPGRNGQVGPPGPPGADGLPGQKGDVGPEGPP
GFRGNDGPVGPKGNMGIGFTGSKGEPGEKGSQGPRGLPGNCSEPSHKVPDSIVGPPGERG
PKGSKGEPGMKGDPGQSGNPGPSGKHGDIGMKGEKGLPGHPGPRGKDGYPGPVGPPGFKG
DRGDEGLPGLKGVSGLRGDPGVPGEPGPRGLPGPPGLPGGSQGMAGPAGPPGPKGAPGLP
GPPGKDGFPGDLGPRGLPGDAGGPGLPGIPGREGPPGPKGDKGDNGLPGLPGLDGPTGYP
GAPGPKGEPGPKGVPGISYPGIKGMDGSNGLDGFPGAKGERGPKGERGAPGDSLEGIPGR
PGPVGPKGDKGYDGLPGTPGTPGTPGSKGEKGGSCLSCVPGVKGEKGERGRDGAPGQAGA
RGHDGIQGAPGERGDDGLPGPPGPPGAEGIPGRPGRDGERGDKGEPAIFDPLVIPPGVGQ
KGEKGVPGLSGPPGFDGRDGPPGPPGLDGMRGLKGEKGFPGVPGSPGQPGPEGRPGPIGQ
KGDTGYGRKGEPGERGPKGQQGFVGMKGEKGLRGPPGPGSLTDPVRGPAGPPGEPGRPGL
DGLQGPKGDAGIPGRDGFPGVKGERGDSGYPGQPGPRGLPGPRGEKGEQGPPGIHGEPGA
KGNPGPPGLDGPPGPIGEPGFPGSGLPGPPGLPGFPGLKGDRGFPGGPGLPGEPGLPGFP
GPKGDTGLPGLPGVLGEKGSKGEPAREGTPGPQGPQGLPGLPGEKGEPGYPGLSGSPGVP
GLPGQKGEAGFPGLPGLPGFDGAPGTPGEPGRDGTIGFPGAQGEKGDKGGPGFPGIPGQR
GADGLPGLAGEKGDAGYPGAPGSVGPPGAPGLKGEPGLPGLPGQKGIPGDVSEKGDRGYP
GLPGAPGPVGPPGAPGYDGVAGLKGDPGPPGQGLPGLQGPPGEKGADGFPGVPGTPGEKG
ADGAPGFPGVKGDRGFPGIPGPPGQPGRDGAPGIPGPKGLDGAPGLQGTKGDRGQDGYPG
ATGPAGPVGPTGSPGFPGLDGAPGQKGDRGYPGIPGVKGEKGVKGDEGVPGFPGIPGEKG
NRGYDGAPGLPGDKGDRGAPGLPGLAGLDGERGFPGAPGPQGLPGLPGQGGVGAKGEKGD
VGRPGLDGFPGLPGLKGDTGFPGLPGQRGPPGESPVEGIPGQKGERGYPGPPGLPGQNGY
PGPKGQDGFPGLDGEKGDAGFPGLPGPPGPPGSPGLPGQDGYPGVTGAKGDKGDAGFPGL
PGLMGLKGEPGLPGFAGLDGPPGFPGLQGDRGEPGLVIQGEKGERGLPGSPGLPGPKGNP
GAPGFPGLKGDAGRPGPQGPPGPVGPVGPKGERGLQGTAGLPGLPGAQGQPGNPGLPGLP
GGDYLMGILLVRHSQSATVPTCFNGMTKLWDGYSLLYIEGNEKSHNQDLGYAGSCLRRFS
TMPFLFCDFNSVCNYASRNDKSYWLSTNAPIPMMPVGEDTIRQYISRCVVCEAPANVIAV
HSQSMSIPECPSGGWNQLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGA
RGTCHYFANKLSFWLSTIEQDFQFERPVSETLKAGKLRNRVSRCAVCIKDSNIGF
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctcgggtctagcccaaagattgctgctgctatctacactcgcactgtgcttc
tatagcgcactgtcttctaattacccggcagagtaccgggaattctatcgcgacccctca
cggtacaacagaaccggatggaacaacggccgggaccagggcggagtccggcgaggtggt
tataacggctacgctgaacaaaggaactgcagctcatgctcgggatgcaggtgtatagga
gaaaaaggatctcggggaacgccgggtctctccggtccaccgggccctcctggtatccag
ggacaccctggacccgaaggtctgccaggcgataaaggagaaaagggagaagctggtcgc
gacggaccccgcggccccaagggagaacggggaaaaatgggtatgcctggcttccctgga
attaacggaataccgggcattccgggatctccgggatccagaggaactcctggtctcgat
ggttgcaatggtacaaagggagatcctggaccagtcggtcctctgggaccgcacggaccg
cctggcgatccgggtccaccgggtccgcctggaccgagaggagagcccgcctacggaccc
cctggaacaaagggagagaagggcgaccccggacgtaatggtcaagttggacctcccgga
cctccgggagctgatggccttcctggacaaaagggcgacgttggccctgaaggaccaccg
ggtttccgaggaaacgatggaccggtaggacctaaaggaaacatgggcattggcttcact
ggaagcaagggagaacccggcgaaaaaggctctcagggaccacgtggactacccgggaac
tgcagcgagccaagtcataaggttcccgacagcattgttggcccccctggcgagagagga
cctaagggcagcaagggagagcctggtatgaaaggagatcctggacagtccggaaatcca
ggaccaagcggaaaacacggtgacatcggcatgaaaggagaaaagggcttgccaggccac
ccaggtcccaggggcaaagacggctacccaggtcccgtagggccaccgggatttaagggt
gacagaggagatgaaggtcttcctggtttgaaaggagtcagcggtctgagaggcgacccc
ggcgtccccggtgaaccaggtccccgtggtctaccaggaccacctggtcttccaggagga
tcgcaaggcatggccggtcccgctggacctcccggtcctaaaggggcgccaggtctccct
ggtccacccggaaaagacggattccccggcgaccttggtcctcgcggtttaccgggagat
gccggaggacccggcctgcccggcatcccaggccgtgaaggtccgcctgggcctaagggt
gacaagggtgacaacggacttccaggcctgcctggtctcgacggccctacgggctaccca
ggagccccaggtcccaagggtgaacctggtccgaagggagtccccggcatctcctacccg
ggtatcaagggcatggatggcagcaacggtctcgatggcttccctggcgcaaagggagaa
aggggacccaagggagagcgcggtgctcccggtgactctctggagggaattcctggtcga
cccggccccgttggaccgaagggagataaaggctacgacgggttacccggcacacctggc
acacctggaactccaggctccaaaggcgagaagggtggcagttgcttgtcctgcgtgccg
ggcgttaaaggcgaaaaaggtgagcgcggtcgtgacggagcaccgggccaggctggagcg
agaggccacgatggaattcagggtgcccctggagaacgcggagacgacggcctacccgga
ccaccaggaccgcctggcgcggagggtattcccggcaggccaggccgcgacggagagcgg
ggagacaagggtgaaccggcaatttttgacccacttgtcatcccgccgggagtcggccag
aaaggagaaaagggcgtaccaggactctcaggaccccccggcttcgacggccgtgacgga
cctccaggacctcccggtcttgacggaatgcgtggactgaagggcgaaaagggtttccct
ggcgttcccggaagtcccggtcagcctggacctgagggtcggccgggtcctataggacag
aagggagacaccggatacggtcgcaagggtgaaccgggcgagaggggccccaagggacag
caaggcttcgtcggaatgaagggcgagaagggattgcgtggtccaccaggtcccggcagc
ttgacggacccagtgcgtggacctgccggacccccgggagaaccgggtaggcctggcctg
gacggactgcagggacccaagggtgacgctggcattcctggtcgcgacggattcccgggt
gtgaagggagaaaggggagactctgggtaccctggacagcccggccccagaggtctaccg
ggacctcgtggcgagaagggtgagcagggacctccaggcattcacggagaaccaggagca
aagggcaaccccggaccaccgggtctcgacgggcccccaggacccattggtgaacctggc
ttccccggctccggcctgccaggaccgcccggtctgcccggcttccctggactgaaggga
gacaggggattcccaggaggccccggcttgccaggtgaaccgggactgccgggattcccg
ggtcccaaaggtgacaccggcctccccggtttgcccggtgtcttgggtgaaaagggtagc
aaaggtgaaccagccagagaaggtacccccggacctcaaggacctcaaggtttgcccgga
cttcctggggaaaaaggcgagcccggctaccccggcctatcaggatcacccggcgtacca
gggcttccaggacaaaagggcgaagccggctttcctggcctgcccggtctccctggtttc
gacggagcgccaggaacgcctggagagcccggacgtgacggcacaatcggcttcccggga
gcacaaggtgaaaagggtgacaaaggaggtcctggcttccctggaattcctggccagcgt
ggtgccgatggactacccggtcttgccggcgaaaaaggcgacgccggctaccccggtgct
ccaggctccgttggtcccccaggagcgcctggacttaaaggagaacctggactacccgga
ctgcctggacaaaagggtatacctggcgacgtttccgagaagggagacagaggctacccg
ggtcttccgggagcccctggcccagttggtccccctggagcacctggttatgacggagtt
gctggcctgaagggagatcctggaccaccaggccaaggtctgccaggtcttcagggcccg
ccaggagagaaaggagctgacggtttcccaggagtgcccggaacaccaggagagaagggt
gccgatggagcacccggatttcctggcgttaaaggagacaggggcttccccggtatccca
ggcccaccgggtcagccgggacgtgatggagcaccaggcataccaggaccaaagggattg
gatggtgccccaggcttacaaggcaccaagggcgaccgcggccaagatggctatccggga
gctacgggtcccgcaggacctgtcggacctaccggatcacctggtttccccggcctggac
ggagcgccaggccaaaagggagaccgtggctaccctggaatccctggtgtaaagggagaa
aagggtgtgaagggagacgaaggcgttcctggctttccgggcattcctggtgaaaaagga
aatcgaggatacgatggcgctcccggactcccaggtgacaagggagacagaggggcgccc
ggactgccaggtctcgctggcctcgacggagagcgagggttcccaggtgctcccggacct
cagggtctccctggacttccaggccaaggtggagttggtgccaagggtgaaaagggcgac
gtcggtcgacccggcctagacggttttcctggacttcctggtcttaagggtgacacgggt
ttccccggtctgcccggccagagaggacccccaggcgagtctcccgttgaaggtattcct
ggacagaagggcgagcgcggctaccccggtccacctggtctgcctggtcagaacggctac
ccgggtcccaagggtcaggacggtttcccaggcctcgacggtgagaagggagatgccggc
ttcccaggccttcccggacccccaggaccacctggatcgcccggacttcccggccaagat
ggataccctggtgttactggagcaaagggtgacaagggtgacgccggattcccgggtctt
ccaggcttgatgggactcaagggagaacctggtcttcctggattcgctggtttggacggt
ccccccgggttccctggtcttcagggagacagaggagaaccaggtcttgtaattcaaggc
gaaaagggcgaacgcggactgccaggttctccggggctaccaggacctaagggcaaccca
ggagcccctggtttcccagggctgaagggagacgctggtcgaccgggtccacagggtcct
ccaggaccggtgggtcctgtgggaccaaagggagaacgcggtcttcaaggtaccgcgggt
ctgccgggtctaccgggtgcacaaggtcaaccaggcaatccgggtctgccagggctgccc
ggcggcgactacctcatgggaatcttgctggttcgccacagccagtcggcgaccgtgccg
acctgcttcaatggcatgaccaagctttgggacggttactcactcctatacatcgaaggc
aatgagaagtcccacaaccaagatctcggttacgccggctcctgcctgaggagatttagc
accatgccgttcctgttttgcgacttcaacagcgtgtgcaattatgccagccgtaacgac
aagtcctactggctttcgacgaacgccccgataccaatgatgcccgtcggagaagacacc
attaggcagtacatcagtcgatgcgtggtgtgtgaagccccggccaacgtcatagcagtc
cacagccagtccatgtcgatacccgagtgtccatctggaggatggaaccagttgtggatc
ggctacagttttgccatgcacacggccgccggcgccgagggaggtggtcagtcgctgtcc
agtcccggatcctgcctcgaggatttccgggccacaccgttcattgagtgcaacggtgcg
cgtggaacgtgccactacttcgccaataagctcagcttctggctgtccacaatcgagcag
gacttccagttcgaacggcctgtcagcgaaacgctcaaggctggcaagcttcgcaaccgt
gttagtcgctgtgctgtatgcatcaaggactccaacatcggcttctag
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