Rhipicephalus sanguineus (brown dog tick): 119397272
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Entry
119397272 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan04512
ECM-receptor interaction
rsan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119397272
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119397272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsan04147
]
119397272
00536 Glycosaminoglycan binding proteins [BR:
rsan00536
]
119397272
Exosome [BR:
rsan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119397272
Glycosaminoglycan binding proteins [BR:
rsan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119397272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119397272
NCBI-ProteinID:
XP_037520633
LinkDB
All DBs
Position
1:123806269..123904428
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AA seq
1772 aa
AA seq
DB search
MPSPPGRDKGARPRLTAAASALGLILVLLLHLPSGADAAACKGCSIQPCLCKGEKGAVGH
PGLPGSPGTEGSPGDLGPLGPIGRRGERGLTGDTGAIGPKGIRGEPGAPGFPGRPGAPGK
PGLDGLFGEPGIPGCNGSKGLLGPHGPAGGWGPPGPRGPRGNYGPKGLPGDGGINSLGIR
GDPGDDGRPGPQGALGFPGFHGEKGVRGDSGPAGRPGPPGAPGPKGVQGDDAQGDKGPKG
EPGLPGDRGAPGDSYFAAGLPTVLQIPGDRGPKGEKGDVGSKGERGSRGVDGEAGLPGSD
GFKGEKGDLGEEGPRGKRGKEGLEGPAGDKGQKGEPGFTGIDGGAGDTGEAGEKGRPGNY
GRQGPPGPPGPTIAIGSPIPGPRGPQGAPGDTGLPGRDGEKGATGPMGYRGTVGEPGIPG
EAGAAGPRGLAIKGEPGEDGYPGLPGLQGQQGLPGPQGPVGDKGQPGLTVIGAPGEDGRP
GRDGRPGIPGVRGDPGPPGDQGTPGRGVPRPGPDGPIGLRGPPGDQGIPGRPGIPGADGR
PGPRGDDCGYCPPGIPGDRGAPGEDGRPGPDGSTGFPGTTGPSGVKGDRGYPGARGIPGL
PGRDGEPGWDGQKGEKGLPGEFIFPPGPLPPGSIKGEKGEPGDYGPRGLSGREGNPGPMG
LPGIGGPKGDPGDFGDPGYRGSDGQEGFPGLAGRKGEAGDAYFGEKGDDGEPGEPGDMGP
TGPPGEMGDPGLPVNIPDSLIHLTGPKGEPGFPGPNGREGPKGDKGSPGYNGLPGRQGEK
GDHGTPGYSQQGPEGLKGYPGLAGDQGPSGRRGAPGTSGERGYDGRPGPKGARGRPGSGK
GTGPQGLPGILGLKGEQGQPGYPGAPGPAGQPGFAGLKGQTGEPGYVGYPGPKGVKGDAG
DAGIGTQGPPGPPGYDGQKGERGVPGLPGTDGSPGFPGLKGEAGAAGAPGPRGRDGQPGT
RGQPGTPGLEGYPGSPGRKGEAGDFGSPGWDGLAGEPGYPGLKGVKGERGLSGLPGYQGL
PGRPGXSGERGEAGYPGLPGLKGDRALRGIRGDDGYPGPDGLPGPKGPVGFPGLPGRKGE
RGEPGRALGAPDGLPGEPGPRGYDGFPGLAGLKGEAGNPGLPGPRGLDGEPGFPGVAGLD
GANGFPGLPGLPGPDGFPGLPGFPGLKGDPGFDGRPGAAGPPGPPGLPGPPGFDGKPGIK
GETGEPGYPGLSTFEISKGDKGEPGRPGLPGSRGAPGDDGYPGLKGAKGQVGEPGFDGAP
GIAGRPGPKGYPGDPGPPGMDGAPATDVYPGPKGDEGIPGPPGFPGIPGLKGEAGEPGPD
GPDGPPGYPGVAPIGFKGEQGDAGVSGLPGTPGQIGSPGQPGYPGIPGSKGIRGDDGFPG
PVVPGPPGLPGPRGQDGQRGYKGEKGAPGESGFSGFPGLKGERGDDGLPGPPGRPGVNGT
KGAKGQRGSSDGPVDYRPQGFPGEPGYPGANGLPGLPGDQGFPGVNGEPGDNGLPGFPGL
PGYSGPRGLPGDEGFQGLPGFPGTPGTPGRPGNRGPPGGPARSRGYFFTRHSQTSRIPEC
PRGTHPLWSGYSLLYILGDEKAHGQDLGSAGSCLRRFSTMPFLFCSLNNVCNFASRNDYS
YWLSTPEPMPMAMTPIVGRDIQKYISRCSVCESSTQVIAIHSQTLEVPECPEGWDGVWSG
YSFFMNTDSGAEGSGQPLVSPGSCLEEFRPNPFIECHGHGRCNYYTTAFSYWLATIERHD
MFRPPDPQTLKAGDLRTRVSRCKVCRRQVIVP
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcccccccggcagggacaaaggcgctcggccgcggctgaccgctgccgcatct
gcactcggcctcatactcgtcctcttactccacctgccgtccggcgccgacgctgcggcg
tgcaaagggtgctctatccagccatgcctgtgcaaaggtgaaaaaggagccgtgggccac
cctgggcttcccggatcgccgggcaccgagggatcgccaggagaccttggtcccctggga
ccgattggtcgccgaggcgaacgaggtttgaccggagacaccggagccatcggacccaaa
ggaattcgaggtgaaccaggggcaccaggattcccaggcaggccaggtgcaccgggaaaa
ccaggtctcgatgggctgtttggagagccgggaataccgggatgcaacggaagcaagggt
ctactcggaccccatggtccagccggtggctggggaccgccaggaccacgtggtcctcgc
ggaaactacggacccaagggtttgcctggagatggtgggataaactcccttggaattcgt
ggagacccaggagacgacggaagaccgggccctcagggcgcacttggtttcccaggtttt
catggcgagaaaggtgttcgaggagacagtggaccagcgggaagaccgggccctccagga
gcgccaggtcccaaaggtgtccagggtgatgacgcgcaaggcgacaagggacctaaggga
gagccaggtcttcctggagatagaggtgctcctggtgactcctatttcgctgctgggttg
ccaacagttctacaaatccccggtgacagaggaccaaagggtgaaaagggagatgttgga
agcaaaggtgaacgtggatcacgcggagtggatggagaagccggcctgcctggcagcgac
ggattcaagggagaaaaaggagacttaggcgaggaaggtccaaggggcaaaaggggcaaa
gaggggctcgagggtccggccggagataaaggacagaaaggagaaccaggattcacggga
attgatggtggcgccggtgacacgggagaagcgggagagaaaggaaggcccggaaattac
ggacgacaaggaccaccgggcccaccgggaccgaccatagcgatcggatcgcccataccc
ggtcccaggggcccccaaggagcacctggtgacacgggtctacctggacgagacggagaa
aagggtgccactggtcccatgggctaccgtggtacagtaggtgaaccaggcataccagga
gaagcaggagcagctggacctcgaggacttgccatcaagggcgagccaggagaggacggt
tatccgggattgccaggcctgcagggtcagcaaggacttccagggcctcaaggcccggta
ggagataagggccaaccgggtctcacagtaatcggcgctcccggagaagatggccgtccg
ggaagagatggacgaccgggcattcctggtgtacgcggagatcccggaccaccaggtgac
cagggcacacctggtcgtggcgtgccaaggcctggccccgatggacccataggtctacgt
ggaccaccgggtgaccaaggaattcctggtcggccgggtatcccgggtgcagatggccgt
ccgggacccagaggtgacgactgcggctactgcccaccgggtatacctggagatcgtggc
gcacctggagaagacggccgccctggccccgatggctcaacgggattccccggaactacg
ggtccgtctggagtgaaaggtgacagaggctatcctggtgctcgaggcatccctggccta
ccgggtcgagacggagaacccggctgggacggacagaagggcgagaaaggcttaccgggc
gaattcatctttccgccgggcccgctaccgccgggctccatcaaaggcgagaagggcgaa
cccggagactacggacctaggggcctgtctggtcgcgagggcaaccctggacccatgggc
ctgcctggaatagggggacccaagggagacccgggcgacttcggagaccctggttaccgc
ggctctgacggccaggaaggctttcctggtcttgctggtcgcaagggagaagccggagac
gcctacttcggcgagaagggagacgacggcgagccaggagagcccggagacatgggaccc
accggaccgcccggagaaatgggtgaccccggactgcccgtaaacattccggactccctg
atacacttgacgggaccaaaaggtgaaccaggatttcctggcccgaatggccgagaggga
ccaaaaggcgacaaaggatcgcccggctacaacggcttgcccgggcggcagggagagaag
ggagaccacggcacaccgggctactcccaacaaggacccgaaggtcttaagggttacccg
ggtctcgccggagaccaaggaccttccggtcgccgtggtgcccctggaacgagcggagaa
cgcggctacgatggacgtcctggcccgaagggtgctcgaggacggcctggctcgggcaag
ggcacaggaccgcagggcctgccgggtattctgggtctaaagggcgagcagggccagcct
ggataccctggagctcctggtcctgctggacagccaggattcgccggattgaagggacaa
acaggtgaaccgggctatgtcggataccccggaccaaaaggagtgaagggtgacgctggc
gatgctggaatcgggacgcaagggccccctggacctcctggatacgacggccagaaggga
gaacgaggcgtacccggccttccgggcactgacggttcccccgggtttcccggactaaag
ggagaagcgggagcagcgggcgcaccaggaccacggggccgcgacggccaacccggcacc
cggggacagccaggaacgccgggtctcgaaggatacccgggctcaccaggccgaaaaggc
gaggctggagattttggttcacctggctgggacggacttgccggagagccaggataccct
gggcttaaaggagtcaaaggagagcggggcctaagtggactgcccggatatcagggtctt
cctggcaggccgggcncttccggtgaacgtggagaagccggatacccgggtcttccgggt
ctgaagggagacagggctctacgaggaattcggggtgacgacggctacccaggacccgac
ggtctgcctggtccaaagggtccggtcggattccctggtcttcctggaaggaagggagag
cgcggagagccaggccgagcactgggcgcgccagacggactaccgggagaaccgggaccc
aggggctacgacggattccccggcctggctggattaaaaggcgaagccggaaaccctgga
ctccccggccctcgtggattagacggagaaccaggattcccgggcgttgcaggcctcgac
ggcgcgaacggttttccaggactccccggtctccctggccctgacggattcccaggcctt
ccaggattccctggcttaaagggcgaccccggctttgatggacgcccaggcgccgctggt
ccgccgggtccaccaggtcttcctggacctccgggttttgacggcaaaccaggaatcaag
ggagaaacaggagagcccggatatcccggtctttcgacgttcgagatcagtaagggagac
aaaggagagccgggccgaccgggactgcccgggtcacgaggcgctcccggtgacgacggc
tacccaggccttaaaggcgcgaagggccaggtcggtgagcccggtttcgacggcgcgccg
ggcattgcgggaagacccggccccaaaggatacccaggcgaccctgggccccctggaatg
gatggagcacccgctaccgacgtctacccaggaccaaaaggagacgaaggaattcccgga
ccgcctggtttccccggtatcccgggactcaaaggtgaagcaggagaaccaggaccagat
ggaccagatggaccgcccggctatccaggtgtcgccccgatcggcttcaagggtgaacaa
ggagacgcaggagtgagcggccttccaggcacccccggccaaataggttctccgggacag
cctggttaccccggcatcccaggatcgaagggtatccgaggcgatgacggttttccgggg
cctgttgttcccggaccaccgggattaccagggccgaggggacaagacggccagcgaggc
tacaaaggcgaaaagggggcgcctggagaatccggattctctggtttccctggactcaaa
ggcgagagaggtgacgacggattgcccggacctccaggaaggcccggtgtaaacggcaca
aagggtgctaaaggacaacgtggcagtagcgatggtccagtcgattataggcctcaaggt
ttcccaggagaaccaggctacccaggagccaacggattaccaggtctgcccggcgaccaa
ggtttcccgggagtcaacggcgaaccaggagacaacgggcttccgggattcccgggactt
ccgggctactctggcccccgaggtcttccgggcgacgaaggattccaaggactaccaggc
ttccccggtacgccaggcactccgggacgtccaggaaatcgtggtcctccaggtggtccc
gccaggtcccgaggctacttcttcaccaggcacagccagacgtcgcgaattccggaatgt
cccagaggcactcatccgctctggtctggctattctctcctctacattctcggggatgag
aaagcccacggccaagacttgggaagcgccggaagctgcttgcggagattcagcacgatg
ccgttcctgttctgcagcttgaataatgtttgcaacttcgcatcgaggaacgactacagc
tactggctcagcactccggaaccaatgcccatggcaatgacaccaattgtgggaagagac
atccagaaatacatcagccgatgcagtgtctgcgagtcttccacgcaagtcatagccata
cacagccagactttggaggtaccagagtgccctgaaggctgggatggcgtttggtctggc
tacagcttcttcatgaacaccgactcgggagcagagggcagcggccagcccttggtttca
ccaggttcctgtctcgaagagttccgacctaatccctttattgaatgtcatggtcatggc
cggtgcaactactacaccacggccttcagctactggttggcaacaatcgaacgacacgat
atgttcagaccaccagacccacaaacgctcaaggcgggtgatctgagaacacgagtttct
cgctgcaaagtttgcaggcggcaggttattgtcccttga
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integrated database retrieval system
