Rhipicephalus sanguineus (brown dog tick): 119399247
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Entry
119399247 CDS
T07382
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03430
Mismatch repair
rsan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119399247
03460 Fanconi anemia pathway
119399247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119399247
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119399247
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF1995
Motif
Other DBs
NCBI-GeneID:
119399247
NCBI-ProteinID:
XP_049273544
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Position
7:167222099..167241948
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AA seq
902 aa
AA seq
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MSKEIKAIDGSTVHRICSGQVVLSLAIAVKELVENSIDAGARNISVKLKDHGSKLVEVID
DGEGVDETNFAALTLKYHTSKLRQFSDLEDVTTFGFRGEALSSLCALCNVTIATRHKDAE
QATLLKFDHHGVITSRSPCARDRGTTVSLHNLFTTLPVRHREFLANLKREFGRMITLLTG
YCLVATEVNISCANFNEAGRKQVILNSQGSQAIRERIATVYGAKEAAKLLEIQQCALTEE
ILEEFSLTESLVEASSARIEGYISSCAHGSGRSSADRQFVFVNSRPCEMPKLTKLVNSTY
HMFNRDQYPFLLINIHLERHSVDVNVTPDKRSVFVHHEKCLLAIVKCSLLAMFRPIAATY
ERQGLSSSPALSQSSQQSPLSLYLSPRLQNLSPSDKGPLSTPVKRTSSALGTPSGRSSAA
LQSFKFRRLESSGRSAGTPLFGKSSPSCSQSTNTTSSQGSSVSESLEPSCSDEEVLLEDS
VGLWSSPGGVGALRKRDKESSAVGAFHSLPLSSHNSATQGAQSSKGHSQSQPQDLVLSSV
GQRAVRTSHMLPKSSPSLRTDKLHGKETGSPGIRSLDRFRFGSCVKSTEVSAVQRTTCDS
TDRLGETVEAASEESVDNEGDGDIIENDVLCPVENEEQQDEVVEVDQQVSGRRQTKPFNF
SCKNLELLIDSMKLDSSDKPGAEKLYRGFRAAITPADNAAAENELSKQISKDMFAEMKII
GQFNLGFIITQLGEDLFIIDQHAADEKYNFEMLQRDVVMETQRLLMPQALELTAVNEMVL
TENLEIFEKNGFGFEVDESLPLGQRVRLVSVPVSGNWQFGKEDVDELIFMLSDNPHTVCR
PSKLRQMFASRACRKSVMVGTALTALTMKKVVSHLGELHHPWNCPHGRPTMRHLINVAIL
PG
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaataaaagcgatcgacggtagtacggtgcatcggatatgctccggtcaa
gtggttctaagcttggccatagctgtgaaggagctggtcgaaaacagcattgacgcagga
gcaaggaacatcagtgtcaaactgaaagaccacggcagcaaacttgtcgaagtcatcgat
gacggggaaggtgtcgacgagacgaatttcgctgctctcaccctgaagtaccacacgtcg
aagttgcgtcaattttctgacctcgaagatgtgacaacatttggttttcgaggagaggca
ctcagttccctgtgtgcactgtgcaatgtaacgattgcaactcgtcacaaggatgccgaa
caggcaacactgctcaagttcgaccaccatggcgtcatcacttcaaggtcgccttgtgcc
agggataggggcaccacggtgagcctgcacaatctgttcaccacgttgcccgtccggcac
cgggagtttctggccaacctgaagcgggagtttggcaggatgatcacgctcctgactgga
tactgcctcgttgccactgaggtcaacatttcatgtgcaaacttcaacgaagcagggcgc
aagcaagtcatcctcaacagccaggggtcgcaggcaatccgggagcgcatagcgactgtg
tatggtgcaaaagaggctgcaaagctcctggagatacagcagtgtgctctcactgaggaa
atcctggaagagttttcactcaccgagtctctggttgaagcttcgagtgcaaggatagag
ggctacatctcctcatgcgctcatggttcagggcgaagctctgcagacagacaatttgtg
tttgtcaattctcgaccttgcgagatgccaaagcttacaaagctggtgaacagtacgtat
catatgttcaaccgagaccagtaccctttcctgttgatcaacattcatcttgaaagacat
tctgtggatgtaaacgttaccccagacaagcgttcagtattcgttcatcacgagaaatgc
ctcctagccattgtcaagtgctcactcttagcaatgttccggccaatcgcagctacgtac
gagaggcagggcctttcatcgtctcctgcactgtcacaatcatcgcaacagagtccgctg
tctctctatctgagtcctcggctgcagaacttatcaccttctgacaagggtcctttgagc
acgccagtgaaacgcacatcctctgcattgggcaccccatcgggcagatcatctgctgct
ctacagagcttcaagtttcgtcgactcgaaagcagtggtcgttcggcaggcacaccttta
ttcggcaagtcctcgccaagctgctcccaatccacaaataccacgagtagtcaaggttcg
agtgtatctgagtctctcgagccttcgtgttctgatgaggaagtgctgctggaagattct
gttggcctttggagttcacctggtggtgttggggctcttcgtaaaagagataaagagtca
tctgccgtcggtgccttccactcgctacctttgtcatcgcataattcagcaacacaaggt
gcacagagcagtaaaggacacagccagagccagccacaagatttggttttgagtagtgtg
ggccaaagagccgtgcgtacctcacatatgcttcctaaaagcagcccatctttgcgtact
gacaagcttcacggcaaggaaacggggtctcccggaattcgttccctggataggtttcgc
ttcgggtcctgcgtgaaatctacagaagtgtccgcagtgcaaaggactacctgtgatagt
acggatagacttggtgaaactgtggaagcagcatcagaagaatctgttgacaatgaagga
gatggtgacataattgaaaatgacgtcttgtgtcctgtagaaaacgaagaacagcaggac
gaggtggttgaggttgatcaacaggttagtggccgtagacagacaaagcctttcaatttc
agctgtaaaaacctggagctgcttatcgacagcatgaaactggattcatctgataagcct
ggagcagaaaaactttatcgtggcttccgggcagccatcacacctgctgataatgcagca
gctgagaatgagctcagcaaacagattagcaaggacatgtttgcagagatgaagataatt
ggccagtttaacctgggtttcattatcactcaacttggggaagacctctttatcattgac
cagcatgctgccgatgaaaagtacaactttgagatgcttcagcgcgacgttgtcatggag
acgcaacggctacttatgccccaggcacttgagctcacggctgttaacgaaatggtgctc
actgaaaaccttgagatatttgagaaaaatggatttggatttgaggtggacgagtcactg
cctctgggtcaacgtgtccggttggtcagcgtccccgtcagtggcaactggcagtttgga
aaggaagatgtggatgagcttatcttcatgctgagcgacaaccctcataccgtgtgcagg
ccatccaagctgcgtcagatgtttgcctcacgtgcttgccgaaaatcagtcatggttgga
acagctctgactgcacttaccatgaaaaaggtcgtcagtcatcttggtgaactgcatcac
ccttggaattgcccacatggaaggccaacaatgcgtcacctcataaacgttgcaatcctt
ccaggctga
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