Rhipicephalus sanguineus (brown dog tick): 119399311
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Entry
119399311 CDS
T07382
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsan03021
]
119399311
Transcription machinery [BR:
rsan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119399311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
ResIII
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
Tic110
PDCD10_N
Motif
Other DBs
NCBI-GeneID:
119399311
NCBI-ProteinID:
XP_049273290
LinkDB
All DBs
Position
7:16089905..16464249
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AA seq
2120 aa
AA seq
DB search
MTSSRLDRLFLLLDTGSSPVTRRAAAVQLGEVQKLHPHELHNLLAKVRRYLHSSSWDTRI
AASQAVEAIISHVPQWDPPGLPKVEQADDEPAKPGAANTRSASHWMRFENFDLHQVLKHG
GDLLASEGSEFDLDDDLLGGSQSKEVLLQQRRLLNRRLGLEMAERIGLDTSDLFSAEDLS
LNCSSGRAELQTGDDATWDCASTRCQAGVQHYIGDANPAQHADGQNLDTGDVVGQCRACG
KVGSVRGSWKKRGCWDRKYDLSLNTLLISSLVSTAVNVEGIVRSATWTYSSALSTAGAIG
NWATGSREGASAVTNYFPGLTSNWSDAIGTAAAAKESYTGHAETALGLRGRGVEGDLCLL
GATENCLEALVVLFCGAAKHKDVVHEVNYTAQPFQQARHLTLEVFWGRYNAELVKDRFSS
WAVGPSECHLECGTAVGHASTPLLPCPSAGLFRGLKRRASKDGPSLSKRLCTAGPIVVST
KEDTPSDCVVGDNLWEEEHSSDEWPLEAFVVALCQDLFSAAWEVRHGAATALREVIRLHG
RGGGRCSSTPAGQMEAANQLFLEDLSLRLLCVLALDKFGDFVSDQVVAPVRETCAQTLGH
VLNLMTSDKLGSGIDGAEHSSAVRAGICGVLRVLLQLLQRPEWEARHGGLLGIKYLLAVR
KDLTSVLIPVVFEPVFQGLQDQNDDVSAVAAAALVPVTEDFVKILPHQVPRVVETLWDAL
LELDDLTSSTSSILMLLAALLSHSTSVQPTQRSDGCLRDCEQGVVQSPGKTTCTDSGCSV
ASAPLARWVPRLWPFLGHNAIAVRLSVLRSLLILCSDKGAPLPLSEWVPPLLPCMLRLLY
QRCLLETSQEVLDLIYQVWEKVVHGAPLGPLLTATCPYLSSWLCLLMHPTHLQVDVVTLQ
WLVLPPNLKPDKRMRRPGSIGGLGPSQCSAEGGPCVLGGGEVYLAGAESLNESPAERERL
VLQCRCMAAKLLGLLSGFVTRPMPGLEVHPVESPVESFARLLLFHLASKSALQRMMTAAV
MAHWVSLHPDHLCPPSVRERVLECLGETLYFDEMASSFTRLQQDARDFIALLRHFQMPLG
PEFPANVVLTVDQVIELVTTVFQGLVQEVRVKPKVLESLEEKRRSLLRAAQQMQKDQVSL
TTRVHSLLSTFLVRLDQLPEKLNPVIRPLMESIRREESVLLQEESADSLVHLMGSCVTRN
PCPNGKIVRNLLTYLCSDSTVATPATAPGNPPTAAILTLINMQKSAERAPVRRSSSVSGG
RKGSLQASQSVESVDDSNGADDENVQRQNEVQRKGAAQVLSVATEHFGASLPNRLPSLWE
ATMEPLLRRANMVFSGGGTHNGEAVAEEQELTTSLQALEVIGPHLHAGLYSKLEATLPPL
CAALDHASPVVRHQASRCFGMMARIRTVPTMAVIVDKVLAKLGASDDDIQRRGAIEAIAC
VIEGLSLGIVPYLVFLVVPVLGRMSDQDEAVRLMATHCFAALVRLMPLDSGAIDEAGGPL
SADLRERRASERHFLEQLMNARHADNYELSVPINAQLRSYQQEGVNWLAFLNKYSLHGIL
CDDMGLGKTLQSICILASDHHKREQLYKETQRADAKPLPSLVVCPPTLTGHWVYEVEKFV
SSQYLQPLHYTGPPMERARLQEKAHKHNLVVASYDIVRNDIDFFATIRWNYCILDEGHII
KNGRTKLARALKQLQANHRLILTGTPIQNQVLDLWSLFDFLMPGFLGTERQFAQRFSRPI
LQSRDAKSSSREQEAGVLAMESLHRQVLPFLLRRVKDDVLQDLPPKIIQDYYCELSPLQV
QLYEDFARSRAKKSVDESVAGASEDQSVNSHATAHVFQALQYLRKVCNHPKLVLNPQHPE
YHRIMAGLQQSESSLSDINHAAKLRSLRQLLLDCGIGTAAQPEQESVVHAHRALIFCQLK
GMLDIVEKDLLMTHMSSVSYLRLDGSVPPGQRQALVQRFNADPSIDVLLLTTQVGGLGLN
LTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMGLQKFKLTI
ANTVITHENSNLSTMGTDQLLDLFTLDSSKGDRAPDPTQHAGPSRAGMKGVLESLPELWD
SSKYDSEYDLGNFLSTLRPK
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcaggctggaccgtctgtttctgcttctggacactggctcctcacctgtg
acacggcgagcggctgcagtccagctgggcgaggtgcagaagctgcatccacacgaactg
cacaacctcctggccaaggtgcgaagatacctgcacagctcatcatgggacacgcgcata
gcagccagccaagctgtggaggccatcatatcccatgtgcctcagtgggatcccccagga
ttgcccaaggtggaacaagcagacgatgagccggccaagccaggagcagcaaataccagg
tctgcatcgcactggatgcgctttgagaattttgacctccaccaagtattgaagcacggt
ggcgacctcctcgcatctgagggttcagagtttgaccttgacgatgacctactaggtggc
tcacagtccaaggaagtgctgctgcagcagcggcggctgcttaatcggcgtttgggcctc
gagatggccgagcgtattggtctggacacctccgatctcttctctgccgaggatctcagc
ctcaactgcagcagtggaagagcagagctgcagactggggacgatgccacatgggactgt
gcctcaaccagatgccaagctggagtgcaacactacatcggggacgcaaatccagcgcag
catgccgacggtcaaaatcttgacactggtgacgtcgttgggcagtgtcgcgcctgtgga
aaagtcggcagtgtgaggggatcctggaagaaacgtggctgttgggaccggaaatatgac
ctgagcctcaacacactcctgatcagcagcctggtcagcacggcagtcaatgtggaaggg
atagtgcgaagcgctacttggacgtacagctctgccttgtcgacagctggagccattggc
aactgggcgaccggttcccgtgagggtgcatctgcggtaactaactatttcccaggcttg
acgtcgaactggagtgatgccattggcaccgctgctgccgccaaggaatcgtacactgga
cacgccgaaactgcacttggccttagagggcgcggcgttgagggtgacctctgcttgttg
ggggcgaccgagaactgcttggaggcgttggtcgtgctcttctgcggtgcggccaaacac
aaggatgtcgtccatgaggttaactacaccgcccaaccttttcagcaggcgcgacacctg
acgctggaagtattctggggccgatataatgccgaattggttaaagaccgctttagcagc
tgggcagtcggaccgtcggaatgtcatttggaatgtggcacagctgttggccatgcgtcc
acacccttactgccttgtccttcggcaggcttgttccgtggcctcaagcggcgtgcaagc
aaggatggacccagcttgtccaagaggctctgcacagcagggcccattgttgttagcacc
aaagaagacacaccatctgattgtgtagtaggcgacaacctctgggaagaagagcactct
tcggatgaatggcccctggaggcctttgtggtggctctctgccaggacctgttcagtgct
gcctgggaagtgaggcatggtgcagctacagctcttcgtgaggtcatccggctgcatggc
cgaggaggtggacgctgctccagcacacctgcaggacagatggaagcagccaaccagttg
tttctggaagacctgtctctgcggctgctgtgtgtccttgcattggacaagtttggggac
ttcgtttccgaccaggtagtggcgcctgtgcgcgagacctgtgcccagaccctgggccat
gttctcaacttgatgacgagtgacaagctgggctccggcatagatggtgcagaacactcc
tctgctgtacgggcaggcatctgtggtgtgttgcgggtgctgctgcagctgcttcagcgg
cccgaatgggaggctcgtcatggtggcctactgggcatcaagtacttgctggccgtacgc
aaggacctgacgtctgtgctgatcccggtcgtgtttgagcccgtgtttcaggggcttcaa
gaccaaaatgatgatgtgagcgctgtggcagccgcagcattggtgccagtcactgaggac
tttgtcaagatcctgcctcaccaggttccccgagtggtggaaacgctgtgggatgcactg
cttgagctggacgacctgacctcctcgacgagcagcattctcatgcttctggccgcactt
ctgtcgcactccacctcagttcagccgactcaaaggtctgatggctgcttgcgtgactgt
gagcagggggtggtgcaaagtcctggtaaaaccacgtgcacagacagtggctgcagtgtt
gccagcgcaccattagcccggtgggtgcctcgactgtggccctttctgggccacaatgca
attgccgtgcgactgtccgtgctgcgttcgctcctcattctctgctcggacaagggggca
ccactgccacttagcgaatgggtaccacccctcttgccgtgcatgttgcgcctgctgtac
cagcgttgcctgctggagacttcacaggaagtccttgatctcatctaccaggtatgggaa
aaagtggtgcatggtgcccccctgggccctctgctgactgctacctgcccttacctcagc
tcctggctgtgcttgctcatgcacccgactcacctgcaggttgatgttgtgacgctgcag
tggttggttcttccgccaaatctcaagccggacaagcggatgcgacgtcccggcagtatt
ggaggccttgggccatcacagtgctcggctgagggcggcccctgtgtgctgggtgggggg
gaagtgtacctggcgggtgcagaatcgttgaatgagagccccgcagaacgagagcgcctg
gtcctgcaatgccgctgcatggctgccaagctgcttggcctgctgtctggttttgtgaca
cgcccgatgcccggactggaggtacatccggtggagagtccagtggagagctttgctcgt
cttctgctctttcacctggcttccaagagtgccctgcagcgcatgatgaccgctgcagtc
atggcacactgggtcagcctacacccggaccatctgtgcccaccatcggtgcgtgaacga
gtgctggagtgcctcggagagacgctctactttgacgagatggccagcagcttcactcgc
ctgcagcaggatgcgcgggacttcattgcgctcctgcgacacttccagatgcctctcggt
ccagaatttccggcaaatgtcgtgctgacagtggaccaagtcatagagctagtcaccaca
gtgttccagggattggtgcaggaggttcgtgtcaagccgaaggtgctggagagcctggag
gaaaagcgcaggtccctgctgcgtgctgctcagcagatgcagaaggaccaggtatcatta
accaccagggtgcactctttgctgtccactttccttgttcgcctggaccagctcccggaa
aagctcaaccctgtcattcgtcctctgatggagtcgatccgtcgggaggagagcgtcctc
ctacaggaggagtccgcagacagcctggtgcatctgatgggcagctgtgtgactcgtaac
ccatgcccaaatggcaagattgtgcgcaacctgctcacgtacctgtgttcagactcaacc
gtggcaacacctgcaacggcaccaggcaacccgccaacggcagccattcttaccctgatc
aacatgcagaagtctgctgaacgggcaccagtgcggcgctcaagttcggtgtcaggtggt
cgcaagggatccctgcaggcttcccagtcggttgagagcgtcgatgactccaatggtgct
gatgatgagaatgtccagcggcagaacgaggtccagcgaaaaggagctgcccaggttttg
tcggtggcgaccgagcacttcggggcatccctgcccaaccggctgcccagcctctgggag
gccactatggagccactgctccggagggccaacatggtcttttcaggtggtggcacgcat
aatggtgaagcggtggctgaagaacaggagctgacaacaagtctgcaagccttggaagtc
atcggaccacacctacatgcagggctttactccaagctggaagccacactgccaccgctg
tgtgctgccctggaccatgcttctccagtggtgcgtcaccaggcgtcccgctgctttggc
atgatggcccgcatccggacagtgccaaccatggcagtcattgtggacaaagtcttggcc
aaactgggggcttcagatgatgacattcagcggcggggagctatcgaagccattgcttgt
gtcattgaggggctctccctgggcatcgtgccgtacctggtgttcttggtggtgcctgtt
ctgggccgcatgagtgaccaggatgaagctgtccggcttatggccacccactgctttgct
gccctggttcgcctgatgccccttgacagtggtgccattgacgaggccggaggacccctg
tcggccgacctgcgtgagcgccgagcgagtgagcgccatttcttggagcagctgatgaat
gcacggcatgcagacaactatgaactgagtgtgcccatcaatgcacagttgcgctcttac
caacaggagggtgtgaactggttggcattcctgaataagtacagcctgcacggcatctta
tgcgatgacatgggtctgggcaagacgctccagtccatctgcattctggcctcagaccac
cacaaaagagagcagctgtacaaggaaacgcagcgtgcagatgccaagcctcttccctca
ttggtcgtgtgcccgcctacgttaacaggtcactgggtgtacgaggtggagaagtttgtc
tcaagccagtacctgcaaccactgcactacacgggacccccaatggagcgtgccaggctg
caggagaaagcacacaagcacaacctggtggtggcctcatacgacattgtgcgcaacgac
attgatttttttgctaccatcaggtggaactactgcattcttgacgaggggcacatcatc
aagaatggacgaaccaagttggcacgtgccctgaagcagctgcaggccaaccaccggctc
attctgaccggcacacccatccagaaccaagtgcttgacctgtggtccctgttcgacttc
ctcatgccgggattcctgggcacggagcggcagttcgcgcaacgctttagccgccctatc
ctacagtcgcgtgacgccaagtcttcctcaagagagcaggaggctggagtgctggccatg
gaaagcttgcatcggcaagtccttccattcttgctgcgtagagtcaaggatgatgtcctg
caggatctgcccccaaaaataatccaggactactactgtgagctgagcccactacaggtg
caactgtacgaggactttgccagaagccgtgcaaagaagtcggtggatgagtctgtcgca
ggggcttctgaggaccagtcagtcaactcgcatgccactgctcatgtgttccaggccctg
cagtacctgcgcaaggtgtgcaaccacccaaagctggttctgaacccacagcaccccgag
taccatcgcatcatggctggcctccagcagtcggaatcctccctttcagacatcaaccat
gctgccaagctacgctcactcaggcaactgctgctggattgtggcattggcacggctgcc
cagcctgagcaggagagtgtggtgcacgcccacagagccctcatcttctgccagttgaag
ggcatgctggacattgttgagaaggacctcctcatgacccacatgagcagtgtcagctac
cttcgcctagatggcagcgtgccgccaggccagcgacaggccctggtccagcgtttcaat
gccgacccttccattgatgtgctgctgctcaccacccaggtcggtggtctgggactcaac
ctgaccggtgccgacacggtcatcttcgttgagcatgactggaaccccatgaaggaccta
caggccatggatcgtgcccatcgcattggtcaaaagaaagtggtgaatgtctacaggctg
atcaccaggggcacccttgaagagaagattatggggctgcagaagttcaagctgactatt
gccaacactgtgatcacacatgagaacagcaacctgagcactatgggcaccgaccagctg
cttgacctgttcacactagacagctccaagggggatagagcgccagaccccacacagcat
gccggtccatcacgtgctggcatgaagggggtgctggaaagcctgccggagctgtgggac
tcctccaagtatgactccgagtacgacctcggaaacttcctcagcacattgaggccaaag
tga
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