Rhipicephalus sanguineus (brown dog tick): 119400184
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Entry
119400184 CDS
T07382
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119400184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119400184
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119400184
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119400184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119400184
NCBI-ProteinID:
XP_037523106
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Position
7:complement(145766696..145815368)
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AA seq
734 aa
AA seq
DB search
MADRRKLQGEIERCLKKVTEGVEQFEDIWQKVYNATNTNQKEKYEADLKKEIKKLQRLRD
QIKTWMASSEIKDKRILMDNRKLIETQMERFKVVERETKTKAYSKEGLGGAQKVDPAQKE
KEDITIWLSNSIASLNIHVDQFESELESLTIGVKKKKNDNQDRVDELKSLLARHRYHILQ
LETLMRMLDNGTVEVCKIKKIKEDVEYYIESCQDPDFEENEFLYDDLDLRDMADFLTKAS
AATTGLEHADNNCILDSATPNANDEAPGADTPASTNSSSPVPSPGLTNHSRSSEQSSQAV
KTARSVVANSGVVNATVNSKAPAPITSRNNSTSSQSSSNSSPSVNSHQNHAVVSPPLTPY
AVAAAANAKGTPSPPPSTAPSIDGAANADHQGHFHRAPSPTQHNSTNATTNNSGSQQLAH
SGTTTLADHGSTVSSAAASLYASLASSQGRPSSPTAPSILHMNGPMVDKSGDSMSSLKSI
AEQAVLNAGLESHLQSPSSQQQQQQQLQQTSLQQSLQQTLQQQQQQQQQQQQQQQQVQSS
SCERSMFESVVGSKEVPRPQQQQQQQPAATTEAHIPPLRGVAPLGPAPLSKECFYQLRLL
EAASMHMPHPSDSERLRPYLPRNPTQVPSYYPQTLPHCDTVEFFQKLSTETLFFVFYYME
GSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWSQRRKEG
FTFEYRYLEDRDLN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagaagaaaactccaaggagaaatagaacggtgtttaaagaaagtaaccgaa
ggcgtggagcaattcgaggacatttggcaaaaggtctacaatgcaactaacacgaaccaa
aaggaaaagtatgaggccgaccttaaaaaagagattaagaagctccagaggttacgagac
caaattaaaacatggatggcgtctagcgagatcaaggacaagcggatccttatggataac
cggaagttgatagagacgcaaatggagaggttcaaggtggttgagcgggagacgaagacc
aaggcatactcgaaggagggcctgggtggcgcgcagaaggtggaccctgcccagaaggag
aaggaggacattaccatctggctctccaactccatcgcctcgctcaacatccacgtcgac
caattcgagagcgagctcgagtccctaaccattggtgtcaagaagaagaaaaacgacaac
caggaccgagtagacgagctgaagtcactgctggcgaggcatcggtatcacatcctgcag
ctcgagaccctaatgaggatgttagacaatggcacggtcgaggtgtgcaaaatcaagaag
atcaaggaggacgtcgagtactacatcgagtcttgtcaggacccggactttgaggagaac
gagttcctgtacgatgacctagacctgcgggacatggcggacttcctgaccaaggcgagt
gcagccacgacgggcctggagcacgcggacaacaactgcatcctggactcggcgacgccc
aatgccaacgacgaagcgccgggtgcagacacgcccgcctccaccaactcgagctcaccg
gtgcctagcccagggctcaccaatcattccaggtctagtgagcagagcagtcaagcggtc
aagacggcgcggagtgtggtggccaactccggcgtcgtcaatgcgacggtcaacagcaag
gcaccagcgcccatcacctctcggaacaacagcacatcgtcacagagcagcagtaacagt
tcgccatcggtcaactcccatcaaaatcatgcggtggtgtccccaccactaacgccctat
gccgttgcagcggcagcgaacgccaaaggcacgccctcccctccgccgtcgacggcaccc
tccatcgacggagcggccaacgcggaccaccagggccatttccaccgggcaccctcgccc
acacagcacaacagcaccaatgccaccacaaacaacagtgggtcacagcaactggcgcac
agcgggacgacgacgctggcggaccacggcagcacggtgtcgtctgcggcagcttccttg
tacgcctcgttggcaagttctcaaggccggccaagctcgcccacggcgccgtcgatactg
cacatgaacggtcccatggtcgacaagagcggggactcaatgtcgtcgctgaagtcgata
gcggagcaggcggtactaaacgctggtctcgagagtcacctacagtcaccatcctcacag
cagcaacagcagcagcagcttcagcaaacgtcgctccagcagtcacttcagcagacactt
caacaacagcagcagcaacagcaacaacaacagcagcagcagcaacaagtgcagtcatcg
tcgtgtgagcgaagtatgtttgagtccgtagtgggcagcaaggaagttccgcggccgcag
cagcagcaacagcagcaacctgcagcgacgacggaggcgcacatcccgcccctaagaggc
gtggcccccctaggccccgcccctctgtccaaggagtgcttctaccagctgcggctgctg
gaggccgcctccatgcacatgccccacccgtcggactctgagcggcttaggccttacctt
ccgcgaaacccgacgcaggtgcccagttactacccacagaccttgcctcactgcgacacg
gtggagttcttccagaagctgtccaccgagacgctcttttttgtattctattacatggag
ggatccaaggcacagtacctggcagccaaggccttaaaaaagcagtcctggaggttccac
accaagtacatgatgtggttccagaggcacgaggagcccaagaccatcacggacgagtac
gaacaggggacgtacatctacttcgattacgagaagtggagtcagaggcgcaaggaaggt
ttcacgttcgagtataggtacttagaagacagagatctgaactga
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