Rhipicephalus sanguineus (brown dog tick): 119401701
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Entry
119401701 CDS
T07382
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsan03041
]
119401701
Spliceosome [BR:
rsan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119401701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
DUF2383
PPTA
LRR_Zer-1
AIP3
NRDE-2
Motif
Other DBs
NCBI-GeneID:
119401701
NCBI-ProteinID:
XP_037524551
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All DBs
Position
8:34561571..34593753
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AA seq
672 aa
AA seq
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MHSSKNGSDSTSSSSSASADAKGGAGDVKKEGKESVELEKYWQVVRSNPADFTGWTYLLQ
YVEQENNLAAAREAFDKFFSYYPYCYGYWKKYADMEKKLCSVEKAEQTFERGVAAIPLSV
DLWIHYINFVKLHFKDEEDYYTKVKNLFERAIESSGQDFRSDRLWDMFVTWELENKNLKE
VTAIYERVLQVPTQLYGHHFEKFQEHVKTHLPKDILSTDEFLQLRQQYMESMRKATPVGP
PGQSGDEAGTAQMEIDEDDGDAPPPGVDDAPPPGVEDATKEDTKALKNDNEAKYIRDKVV
EKRRELFKANEAEVGRRWAFEEGIKRPYFHVKPLERLQLKNWREYLDFETQNGNHARTVI
LYERCLIACALYEDMWMKYIKYLDTAEPEKVNDVFRRACTTHLVRKPSISLAWAAYEEKH
GHFEEASTILAEMEARIPDLLEPTLRRINVERRRGCPEKVEELYRKCISQTESTSLKSHF
AGKLARFLNKVQKKLEDAKEVLKEALDREPTNTRLYMQLADLGYEQCPPDETLVLEAFDQ
AIACTQLPAADKLTFLQRKLEFLEDFGSDVAKVQEAFDEYSKAAKAQEVAQKKRPAEEPQ
ETPEKKPKTAELNGADAAAASAAQAIAAATSSAAADAAAQYNYAQQWGSYPQAYNYQQAW
NAYPASSYYPTH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcactcaagcaaaaacggaagcgacagcacaagcagctcctcctccgcgtcggctgac
gccaaaggtggcgccggcgatgtcaaaaaggaaggtaaggagtcggtggaactggagaag
tactggcaagtggtgcggagcaacccggcggactttactgggtggacctacctgctgcag
tatgtcgaacaggagaacaacctggcagctgcacgggaggcctttgacaagttcttctcc
tactacccctactgctatggctactggaagaagtacgccgacatggagaaaaagctgtgt
tccgtcgagaaagccgagcagacgttcgagcgaggtgtcgctgccattccgctgagtgtc
gacctttggattcactacatcaacttcgtcaagctgcacttcaaggacgaggaagactac
tacaccaaggttaaaaacctgttcgagcgtgccatcgagtcgtcgggccaggactttcgg
tcggatcgtctgtgggacatgtttgtcacgtgggagctggagaacaagaacctcaaagag
gtcaccgccatctacgagcgggtgctccaggtgcccacgcagctctatggacaccacttc
gagaagttccaggagcacgtgaagacgcacttgccaaaggacatcctgtccacggacgaa
ttcctgcagctgaggcagcagtacatggagtccatgcgcaaagccacacccgtggggccg
cccggccagtctggggacgaggcgggcactgcccagatggagatcgacgaggacgacggc
gacgcccctccgccgggtgtggacgacgctcctcctccaggtgttgaggacgccaccaag
gaggacaccaaggcgctgaaaaatgacaatgaggccaagtacatccgggacaaggtggtc
gagaagcggcgagagctgttcaaagcgaacgaggccgaagttggccggcggtgggccttc
gaagaagggatcaagcggccctacttccacgtgaagcccttggaacgactgcagctaaag
aactggcgcgagtacctcgacttcgagacgcagaacggcaaccacgcgaggactgtgatc
ctctacgagcgatgcctcattgcctgcgccctgtacgaggacatgtggatgaagtacata
aagtacttggacacagcggagccagagaaggtgaacgacgtcttccggcgggcatgcaca
actcacctggtccgcaagccgagcatcagccttgcctgggctgcctacgaggagaagcac
ggtcattttgaggaggcctcaaccatcctggccgagatggaggcgcgcataccggacctg
ctggagccgacgctgcgacggatcaacgtggagcggcggcgcggctgccccgaaaaggtg
gaggagctgtaccggaagtgcatctcgcagacggagagcacgtcgctgaagagccacttc
gccggcaagctggccaggttcctcaacaaggttcagaaaaagctggaagacgccaaggaa
gtcttgaaggaggccctcgaccgggagccgacgaacacgcggctctacatgcaactggcc
gacctcggatacgagcagtgcccgccagacgagaccctggtgctggaggcctttgaccag
gccatcgcctgcacccagttgccggccgccgacaagctcaccttcctccaaagaaagctg
gagttcctcgaggacttcggcagcgatgtggccaaggttcaagaagcctttgacgagtat
tccaaggcagccaaggcgcaagaggtggcgcagaagaagaggccagcggaagagccgcag
gagacgccagagaagaagccaaagacggcggagctgaacggagccgatgcagcggccgca
tctgcagcacaagcgatagccgcagccacgtcaagcgcagcagccgatgcagcggcccag
tacaactatgcccagcagtggggcagctacccacaggcctacaactaccagcaagcgtgg
aacgcctaccccgccagttcgtactacccgacgcattga
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