Rhipicephalus sanguineus (brown dog tick): 119404464
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Entry
119404464 CDS
T07382
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119404464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119404464
03009 Ribosome biogenesis [BR:
rsan03009
]
119404464
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119404464
Ribosome biogenesis [BR:
rsan03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
119404464
Pre-60S particles
119404464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
Arm
HEAT_2
Cnd1
HEAT_EF3_N
IBN_N
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
HEAT_MROH2B_C
TPR_DNAAF5
Adaptin_N
MMS19_C
PDS5
HEAT_GCN1_C
HEAT_MROH2B_1st
Ltn1_1st
Dopey_N
INTS7_N
UNC45-central
RTP1_C1
SCD
TPR_TTI1_C
HEAT_DAAF5
MHCassoc_trimer
Motif
Other DBs
NCBI-GeneID:
119404464
NCBI-ProteinID:
XP_049274827
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All DBs
Position
9:3671884..3736929
Genome browser
AA seq
894 aa
AA seq
DB search
MRGSMSLSWQPQEDGLRQILQLLKESQSPDTATQRAVQQKLEELNKYPDFNNYLIFVLTK
LKSEDEPTRSLSGLILKNNVKAHFDKFPREVGDFIKAECLESVGDHSPLIRATVGILITT
IASKGELTQWPELLPRLCQLLDSEDYNVCEGSFGALQKICEDSAEMLDTDALNRPLNVLV
PKFLQFFRHTSPRIRSHAIACINQFIVNRTQALMLHIDSFIENLFHLASDEDSEVRKNVC
RALVMLLEVRMDRLIPHIHNIIEYMLMRTQDTDEGVALEACEFWLSLAEQPICREVLAPH
LSRLVPILVRGMKYSEIDIILLKGDVEEDEMIPDREEDIRPRFHKSKTHSQKHMDDNIDE
DSVSDDGLDDDNTLSDWNLRKCSAAALDVLANVFHEELLGVLLPILKETLFHQGWEIKES
AILALGAIAEGCMVGMVPHLPELIPYLIGCLGDKKALVRSITCWTLSRYSHWVVSQPHDC
YLQPLMTELLKRVLDANKRVQEAACSAFATLEEEACTELVPYLSFILETLVFAFSKYQHK
NLLILYDAIGTLADSVGHHLNKPEYINLLMPPLIEKWNVLKDDDKDLFPLLECLSSVATA
LQSGFLPYCEPVFRRCVSLVEQTLNQNMANAAHPDQFEAPDKDFVIVALDLLSGLAEGLD
GHMESLVMSSNIMQLLYQCMQDLMPEVRQSSFALLGDLTKACFQHVNPCISDFLPILGQN
LNPEIISVCNNATWAIGEISVKLGRDMKPYIPMVLSQLVTIINRPNTPKTLLENTAITIG
RLGYVCPEEVAPMLQQFIRPWCSSLRNIRDNEEKDSAFRGICSMISVNPGGVVHDFIFFC
DAVASWVNPKADLKQTFHEILHGFKNQVGDENWQRFSEQFPPALKERLATNYGV
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcagcatgtcgttatcgtggcaaccacaagaagatggactccggcaaatcctg
cagctactgaaggaatcccagtcaccggacaccgcgacccagcgtgccgtacagcagaaa
cttgaggagttgaacaagtaccccgacttcaacaactacctcatatttgtcctcacaaag
ttgaaatctgaggatgagccgacacggtccctgagcgggctgatcttgaagaacaacgtg
aaggctcactttgacaagttcccgcgggaggtgggcgacttcatcaaggcggaatgcctg
gagagtgtgggcgaccactcacccctcatccgtgccacggtgggcatcctcatcaccacc
atcgcctccaagggcgagctcacccagtggcccgaactactgccccgcctatgccagctc
ctcgactcggaggactacaatgtctgcgagggttctttcggagccctgcagaagatctgc
gaggattcggctgagatgctggacacggatgcgttgaaccggcccctcaacgtgctggtg
cccaagttcctccagttctttcggcacacgagcccccggatccggtcacacgccatcgcc
tgcatcaaccagttcattgtcaaccgcacacaggccctcatgctccacattgactccttt
atcgagaacttgttccaccttgcctcggacgaggactctgaggtgcgcaagaatgtgtgc
cgtgctctagtcatgcttttggaggttcgcatggaccgcctcatcccccacatacacaac
atcatcgagtacatgctgatgcgcacgcaagacacggacgaaggggtcgcgctggaggca
tgcgagttctggctgtcgctggctgagcagcccatctgtcgagaggtgctggcaccgcac
ctgtcgcgcctcgtgcccatcctcgtccggggcatgaagtactcggagattgacatcatc
ctgctcaagggagacgttgaagaggacgagatgattcccgatcgtgaagaggacatccga
ccgaggtttcacaaatccaaaacacacagtcaaaagcacatggacgacaacatcgatgag
gactcggtgtcagatgatggccttgatgatgacaacacgctatcggattggaacctgagg
aagtgctcggctgcagcgctggacgtgctagccaacgtgttccacgaggagctcctgggg
gtgctgctgcccatcttgaaggagacattgttccaccagggctgggagatcaaggagtct
gccatcttggccttgggtgccatcgccgagggctgcatggtgggcatggtgcctcatctg
cccgagctgatcccctacctcatcggctgcctgggcgacaagaaggccctggtgcgctcc
atcacctgttggacgctgagccgctactcccactgggtggtcagccagccgcacgactgt
tacctgcagcccctgatgaccgagctgctcaagcgggtgctggacgccaacaagcgggtg
caggaggcggcctgcagcgccttcgccactctcgaggaagaggcctgcaccgagctggtg
ccctacctgagcttcatcctggagacgctcgtcttcgccttcagcaaataccagcacaag
aaccttctaatactgtacgatgccatagggaccctggcggactctgtcggacatcatctc
aacaaacctgaatacatcaacctgctgatgccaccgttaatcgagaagtggaatgtccta
aaggacgacgataaggatctctttcctctactagagtgcttgtctagtgtggccactgcc
ctccagtccgggttcctgccgtactgcgaacctgtgttcaggaggtgcgtttccctggtg
gagcagacactaaatcagaacatggccaatgcggcccatcccgaccagtttgaggccccc
gacaaggactttgtcatagtggccctggatcttctgagtggtctggctgaaggcctggac
ggtcacatggagagccttgtcatgtcctccaacatcatgcagctgctctaccagtgcatg
caggacttgatgcctgaagtgcggcagagttcatttgctctgctcggcgacctcaccaag
gcttgcttccagcacgtgaatccctgcatctctgacttccttcccattctcggtcagaac
ctgaacccagagattatatctgtgtgcaataatgcaacatgggccattggcgagatctct
gtcaaacttggcagagacatgaagccgtacatccccatggtgctctctcagttggtgacc
atcatcaaccgtcccaacacaccgaaaactttgctggagaacaccgccattacgatcggg
cgccttggttacgtttgccccgaagaagtggcacccatgttacagcagtttatacgcccg
tggtgttcatcattgcggaacattagggacaacgaagagaaggactctgccttccgcggc
atctgcagcatgatcagtgtgaaccccggtggagttgtgcacgacttcattttcttctgc
gacgccgttgcatcctgggtcaaccccaaggcagacctgaagcagactttccatgagata
ctccacggcttcaagaaccaggttggtgatgagaattggcagcgcttctcagaacagttt
ccacctgccctcaaggagaggctcgcaaccaattacggtgtctga
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