Rhipicephalus sanguineus (brown dog tick): 119404543
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Entry
119404543 CDS
T07382
Name
(RefSeq) uncharacterized protein LOC119404543
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsan03036
]
119404543
Enzymes [BR:
rsan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
119404543
Chromosome and associated proteins [BR:
rsan03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
119404543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
FAD-SLDH
Motif
Other DBs
NCBI-GeneID:
119404543
NCBI-ProteinID:
XP_037527008
EnsemblRapid:
LOC119404543
LinkDB
All DBs
Position
9:7583546..7614932
Genome browser
AA seq
1432 aa
AA seq
DB search
MISLQALTLSSDRVESRSGHHLKMASPPSSRLSFTCVWTQKPGDDVQEFLAAYKRFFEWQ
QVQSVKLQPPRKILKHEWEDQKWLVEISLNLHSRMNADKIESLSVEIARRWCTTGLSDKQ
MSRYLQWLQPDRKNGFWHGWYAIEEGIKMNSIAFGTFVGLDIFAERHAIVGNSTGKGYNI
DCTFRHDERSLQVFIELNHCTTTDVYRLSMSYNNIFNVVVHDPDSGSADVFLHVHTLPLF
HRAEGSVSSSVTVWKAKRPNSRDQMDFQRTLKIGCKQCGLVLESSDVGGCFVIRLSFNDR
HKARRTVGRLSRRCRRARFSFVPVKTHSVGSKAEELRQELCSRIMPKLQFRCCYALTSLI
QMSDDIIVQLMVLEKHEQDTLFKDLERYAAHNEGALEEALFSICTALENRSNVTFAAVLP
ELFKKLCKTYLPPAVPRGSCLVRRLFVTPSRVFFLPPAVHAENRVLRKFDADYALRVSFR
DDHFELLSHTLGSHDKKLEMLNEVVGGFLRNGIKIGDRHFRLLASSVSQLRDHGVWLYAN
DCHGNSVESIRAWMGDFSEIPSVAKKIARMGQCFSTTEESVIVPLHGETMEDAPDIEGGV
HPVSGKRYVFSDGIGVISESLMKKVCAKLDMAQVPSAIQIRYAGYKGMLCTNNALQGDKL
ILRKSMNKFACVTSASIEVIKVSAPSSVFLNRPLITILEQLDVPRRVFLHLQQNMLLQLC
DALVNDGAALRALGTYANTSLPFAKLLANGMSLSREPLIRAMILAVYESLLVGLKEKSRI
AIPSEKGRNMLGVLDETSTLEYGQVFVQYTHLGIDLQNGTPDSGNNHSGGTQVLTGTVLV
TKCPCLHPGDVRKFEAVDVPALHHIRDCIVFPAKGPRPHPNEMAGSDLDGDEYIVIWEQD
LFFPGPNREPMVFSDTSVGAPSTGNLDDDIIQFLCKYILNDSVGIMSNAHLAWADQLPDG
IFSYTCLELAKKISTCLDFAKTGINAELTRSERVQKYPDFMNKRGIKPVYRSKRVLGELY
RLNKTLISNTYHAYTAADFHSALFDYPGWQKHRHAAENARDIYEDMMMRIMNQYGIESEA
EVVAGVINSVSRYNKSKQDKTSVETLVSKQYRELTEAMQKQFVVDVEAVSQRGHSQPTQQ
TLLEMASAWYMVTCSDEQFKEHSLGLPWCIADSLLLLLKDRSCAQSTGKTVPRNLLSAKI
NQHSSGRSSQDAAFDLLCAWARKEDLLCDTVTKASQVCMSCFKRAFQQYLSSSHSSTGAL
SCVKSQGDAGSCGQTAGDFVSGFIRYLTMALTGLPVCNECCSPSGQVHKLTLAALYRYSR
LVMSRDVCCFGLPCDPDLHDSADEVLESDPIRINVQTARFVEMLREQEGLVKELLCRWTG
VEEVNIRLHSYRSRKYHYIIVSAVGRQWQLCCFDELVAQPWLEDAIVNRRLG
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtttacaagcgctgacgctcagctccgatcgagttgaaagccgcagcgggcac
catctaaagatggcctctccaccgagtagtcgcctttctttcacctgtgtgtggactcag
aagcccggtgatgatgttcaggaatttctggcagcatacaaacggttctttgaatggcag
caggtacaaagcgttaagcttcaaccaccgcggaagatcctcaagcatgagtgggaagac
cagaagtggctggttgaaattagccttaatctacattcacgaatgaatgcagataagatt
gagagcttgagtgtagaaatagctcgccggtggtgcacaacgggactcagcgacaagcag
atgtctagatacttgcagtggctgcagcctgaccgcaaaaatggcttttggcatggctgg
tatgccattgaagaaggcatcaagatgaactccatagcatttggcacatttgttggcctg
gacatctttgccgagcgtcatgccatagtcggtaactccactggtaaaggctacaacata
gactgcacattcaggcatgatgagaggtctttgcaggtgttcattgaattgaaccattgc
acaacaacagatgtctaccggcttagcatgtcttacaacaacatttttaatgtggttgtg
cacgatcccgacagtgggtccgcagatgtatttcttcatgtgcacacccttcccttgttt
caccgtgcagaaggcagtgtgagttcttctgtcactgtttggaaggccaaaagaccaaac
tctcgagatcaaatggatttccagagaacgttaaagattggatgcaagcagtgcggccta
gttctggaaagcagtgacgtgggcggctgttttgtcatcaggctgagcttcaatgacagg
cacaaggcacggcgcactgtcggtcgcctaagccgtagatgcagaagagcccgcttcagc
tttgtgcctgtgaaaactcattccgttggcagtaaagctgaagagctacgacaagagttg
tgctcaaggataatgcctaagcttcagtttagatgctgctatgcactcacttccctcatc
caaatgagtgacgacattattgtgcagctgatggtgttagagaagcatgagcaagacact
ctcttcaaagacttggaaaggtatgcagctcacaacgaaggggctctggaagaagccttg
ttcagcatttgcactgctctcgaaaatcggagtaatgtcacctttgctgctgtcttgccc
gagctattcaaaaagctctgcaagacgtatctgccccctgctgtgccaaggggctcctgc
ctcgtacggcgactgttcgtgacaccgtctcgcgtctttttcctgccacccgccgtgcac
gccgagaacagagtgcttcgcaaatttgacgcggattatgcgcttcgagtctcgttccgt
gacgaccactttgaacttttgtcgcacaccctgggatctcatgacaagaagcttgagatg
ctcaatgaagttgtgggaggcttcttgcgtaatggaatcaagattggtgaccgtcacttc
aggcttctggctagctctgtaagccagcttcgagaccatggtgtctggctctacgcaaat
gactgtcatggaaattcagtggagtccatacgggcttggatgggggacttcagtgagatc
cccagcgttgccaagaagatagcacgaatgggtcagtgtttttcgacaacagaagagtct
gtcattgtacctcttcatggcgagactatggaggatgcgccagacatagagggcggcgtg
caccccgtatccggaaagcgctacgttttctcagatggcattggggtgatctcggagtct
cttatgaaaaaggtctgtgcaaagctggacatggcacaggttccatctgccattcagatt
cgctatgcaggctacaaaggcatgctgtgtacaaacaatgctctgcagggcgacaagctc
attctgcgcaaaagcatgaacaagtttgcctgtgtcacgtcagccagcattgaggttatc
aaggtgtctgctccctcatcggtgtttctgaaccgccctttgatcaccattctggagcag
ctggatgttccccggcgggtgttcttgcacttgcagcagaacatgctgcttcagctctgt
gatgcccttgtcaatgacggtgcggctttgagggcgcttggcacctacgcaaacaccagc
ctgccttttgccaagctgcttgcaaacgggatgtccctgagtcgggagccactcattcgc
gccatgatactggctgtctacgagagcttactcgtggggctcaaagaaaagagtcgaatt
gccattccttcagagaagggccgtaacatgttgggtgtccttgatgagactagcaccctt
gagtatggtcaagtgtttgtccagtacacacatttgggcattgacctccagaatggaaca
ccagactctggtaacaaccactcaggtggcacccaagtgctgacgggtactgtgctggtg
accaagtgcccctgcctgcaccctggtgatgtgcgcaagtttgaggcagttgatgtgcct
gctttgcaccacatcagggactgcattgtgtttccagccaaaggtccccggcctcacccc
aacgagatggctggttcagaccttgatggagacgagtacatcgtgatctgggaacaagac
ctcttctttccagggccaaacagggagcccatggtgttcagtgacacttccgttggagct
ccctcgactggaaacctggacgatgacatcattcagttcctctgcaagtacatccttaac
gacagtgtaggcatcatgtccaatgcgcacctggcctgggctgaccagcttccagatggc
attttctcttacacctgtctcgaacttgccaagaaaatctctacctgcctcgacttcgca
aagactggcatcaacgctgaactcactcggtctgaacgtgttcagaagtaccctgatttc
atgaacaagaggggaattaaaccagtgtacaggtctaagagggtactgggagaactctac
cgcctaaacaagacactgatcagcaacacttaccatgcgtatactgcggctgattttcac
agtgccctgtttgattacccaggatggcaaaagcaccggcacgctgcagagaatgcccgt
gatatctatgaagacatgatgatgaggatcatgaatcagtatggcattgagagtgaagct
gaagtggtagcaggggtcattaacagtgtctcacgttacaacaagagcaaacaggacaaa
accagtgtggaaaccttggtttctaaacaatatcgggagctcactgaagcgatgcagaag
cagtttgtcgtagatgtcgaagcagtctctcagcgaggtcatagccagccaacacaacaa
acactgctggagatggcatctgcctggtacatggtaacctgcagcgatgagcagtttaag
gagcatagcttgggtcttccatggtgcattgcagacagcctgctactgcttttgaaagat
cgaagttgtgcacagtcaacaggcaagacggtgccacggaacttgttgtctgcaaagata
aatcagcatagctctggtcgttcatcacaagatgcagcatttgacctgctgtgtgcatgg
gcacgaaaggaagatctattgtgcgatactgttaccaaggcttcccaagtttgcatgtca
tgcttcaagcgggctttccagcaatatttgtctagcagccacagttcaacaggagcactg
agctgcgtcaagtctcaaggagacgcaggcagctgtgggcagactgccggtgacttcgtt
agtgggttcattcgctacctcaccatggcgctgacggggcttccagtttgcaacgagtgc
tgctcaccttctggccaagtgcacaagctgacattggcagccttgtaccgttactctagg
ctggtcatgtcgagggatgtctgctgctttggtcttccttgtgatcctgaccttcatgac
agcgcagacgaggtgctagagtctgaccccatccgtataaatgttcaaacagctcgcttc
gtggagatgttgcgggagcaggaaggcttggtgaaggaactgctgtgccggtggaccggt
gtggaggaggtcaacatccgcctgcacagctaccgttcacgcaaataccattacatcatt
gtctcggctgttggacgccagtggcagctgtgttgttttgatgagctggtagcacagcca
tggcttgaagatgccatcgtcaacagaaggctaggttag
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