Rhipicephalus sanguineus (brown dog tick): 119404568
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Entry
119404568 CDS
T07382
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119404568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119404568
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119404568
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
BslA
Motif
Other DBs
NCBI-GeneID:
119404568
NCBI-ProteinID:
XP_037527041
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All DBs
Position
9:8775010..8815446
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AA seq
579 aa
AA seq
DB search
MRGCEDSPGNMSTGLTEWFRNEVHFWRCVHAVQIVVALQFILTPVALFLLQFSVYSPFDG
FSDWLTSFIDSPWSHICLLGAVFVLAVYHVTCVNVAPVIHVTRLAQVVHFGHPRSHGQAL
LRALAGAIFVRAMLGMSNGPYARVDVRCTPSSELEECMSEAYVFLVLHGAFTAVSLHLSQ
LAAKGSCLAFPPIQVVSLRRHLHISATVRRAAWETIRHAYIYYLLFFFLGSFLKYWIYGD
MEPTIWVGGLQTVWGLIDLRLFWALVVTGTALRTVDQLAVLMRDYFLTKGYQFPVMVQCE
ADRPLQLSTAMASRGCAFVQYLSFQDFRHLAEHSGARRAQVFAVSTPGCHPLHWGALCEA
CLVLVRQFCQALGQVDIPPPTRPTNPPPGTPQAPKTTEGASFLRMRPLAVATPPPDPFQM
MSQVQPPPPQPKLSIVRRMLDALKSNPLTAYFISELPDVKSRQLFADCQPLIWAIEGLCL
LVCASKTEDQYGVVQFSLPNIFSALLELDQLLERHGKRCSILRRPNSSSGRELRLGRALA
ASVSTGLYQMSITFKQHLLSIDLTTESRRRLKQFEDFIR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggttgcgaggatagcccgggaaacatgagtaccggcttgacggaatggtttaga
aatgaggtacacttctggcggtgcgtgcacgctgtccagatagttgtggccttacagttc
attctcaccccggttgccttgttcttgctccagttcagcgtgtactccccgttcgacggc
ttctccgattggctgacatcattcatagactcgccatggagccacatctgccttcttggt
gccgtatttgttctagcagtctaccacgtcacctgcgtaaacgtggcacctgtaatacat
gtgacacgtctggcacaagttgtacactttggtcacccacggagccatggtcaggccttg
ctgcgagctcttgctggggctatcttcgtccgtgctatgcttggtatgtcaaacggccca
tatgctcgtgtggacgtccgctgcaccccatcctctgaactcgaggaatgcatgagtgag
gcgtacgtgtttctggtgctgcacggagcgttcacagctgtcagcctgcacttgagccag
ttggctgccaaagggtcctgccttgcattcccaccgatacaggtggtatctctgagaagg
cacctgcacattagtgccactgtgcgccgagctgcgtgggagaccatcaggcacgcttac
atctattacctgctgttcttttttctaggttcctttctaaaatattggatttatggtgac
atggagccgaccatatgggttggtggtctgcagacagtatggggtctgattgacctgcgg
ctcttctgggcattggtggtcaccggcactgccctcagaaccgtggaccagctggctgta
ctgatgcgagactactttctcactaagggctaccagtttcctgtcatggttcagtgtgaa
gcggacaggcccttgcagctgtcgacggccatggcatcacgtggctgtgcatttgtgcag
tacctgagcttccaggacttccggcacctggctgagcattctggagcccgccgagcacag
gtcttcgcagtcagcacgcccggctgccacccgctgcactggggtgctctgtgtgaagca
tgcctggtgcttgtgcgccaattttgccaggcccttgggcaagtggatatcccgccaccg
acgcgacccactaaccccccgcctggcacacctcaagctccaaaaacaaccgagggtgct
tcattcctgcgtatgcggcctctggcagtggctacaccaccacctgacccttttcaaatg
atgagccaggtccagccaccaccgcctcagccaaaactgtcaatagtaaggcggatgctg
gatgccctgaaaagcaatcctttaacagcttacttcatctcggagttgcctgatgtcaag
agtaggcagctgtttgccgattgccaacctctcatctgggccattgaaggtctgtgcttg
ctggtgtgtgcttccaagactgaagaccagtatggtgtggtgcagttcagcctaccgaac
atattcagtgcactgctggagctggatcagctgctggaacgtcatggcaagcgttgctcc
atcctgcgtcgtcccaacagcagctcgggccgtgagcttcgtctgggaagggccttggca
gcttcggtctcaactggtctttaccagatgtcaatcacatttaaacagcaccttctgtcg
atagacctcacaacggaaagtaggcggcgcctgaagcagtttgaagatttcattcgataa
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