Rhipicephalus sanguineus (brown dog tick): 119404943
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Entry
119404943 CDS
T07382
Name
(RefSeq) exosome complex component RRP45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119404943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119404943
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119404943
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
119404943
NCBI-ProteinID:
XP_037527593
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All DBs
Position
9:33650394..33698493
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AA seq
448 aa
AA seq
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MPNEGHRKNYVRDRPTTMLSNVDLLSNCERDFIKTAVSEDKRVDHRTSKENRHVRVSFGL
DRGCCVASLGDTKVMVQVSAEIIVPKPGRPTEGELFVNLELSPMAAPHFEAGRLGDYGVE
VARLLERCIRDSQCIDLESLCVVSGEKVWALRVDAQVLNHQGNIVECAGIATIGALMHFR
RPDVTVIGTEVTVHNPRDREPVPLHLHHYPFLVCFAFYDDGKTVLVDPTDLEERIAEGLL
SIAANAHDEICLLHQHGCTVRKDLVLLCSRLASVRAKTLATMIKAEIAKDDEGRMKNRRV
GFAAALEVDEDEHLTTLLEPENIEIDDAELQEAQTPPVEKPISAVEAPDVVSKAKVFLEG
IGTAVIGKGGPSSWGVLEHSDRAAKNAGKRNRKRREPSLQVAEDESSSEEEELVVLQPED
SRAAKQSESTAGAAEGDTARGWYPKTPF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgaaggacaccggaaaaattacgtgcgcgacagaccgaccacgatgctgtct
aacgtcgacttgctttccaactgcgaacgcgactttatcaagaccgcagtgtctgaagac
aagcgtgttgaccaccggacttccaaggagaacaggcacgtgcgagtgtccttcggcctc
gacaggggatgctgcgttgcctcactcggcgacaccaaagtgatggtgcaggtgtctgcc
gaaattatagttccgaaaccaggaaggcccacagaaggcgaactctttgtgaaccttgaa
ctgtcgccgatggcagcaccacactttgaagcaggtcgacttggggactatggtgttgag
gtcgctcgcctcttggagcgctgcattcgcgactcccagtgcattgacctggagtccctg
tgcgtggtgtcgggcgagaaagtgtgggcacttcgagtcgacgcgcaggtgttgaatcat
cagggcaacattgttgaatgtgctggcatagcaacgattggtgcactcatgcactttcgc
aggcccgacgtaaccgtcattgggacggaggtgaccgtccacaacccaagagaccgtgaa
ccggttcccctgcacctgcaccattatcctttcctggtgtgctttgccttctacgacgat
ggaaaaactgtgcttgttgacccaactgatctggaagaacggattgccgaggggcttctg
tccatagctgcaaatgcccatgacgagatttgcttgttgcatcagcacggttgtactgtt
cgcaaggatttggtgttgctctgttcccgactggcctcagtccgtgccaaaacgctggct
acgatgattaaggccgaaattgcgaaggatgacgaaggtagaatgaaaaacaggagggtt
ggctttgctgctgccctcgaagttgatgaggatgaacacttgacaacgctgctggagcca
gaaaatatcgaaattgacgatgcagagctacaggaagctcagacaccccctgtcgaaaaa
cccatctcggcagtcgaggcgccagatgttgtatccaaagccaaggtgtttttggaaggt
atagggacggcagtgattggcaaaggtggtcccagcagttggggcgttctggagcattca
gatcgggcagccaaaaatgcaggaaagcgtaacagaaagaggagggaaccttcactacaa
gtggcagaggacgagagcagcagcgaagaggaagagctcgttgtactgcaacctgaagac
tcaagggcagcaaaacaaagtgaaagtaccgctggagctgctgaaggtgatacagctcgt
gggtggtatccaaagactccattctga
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