Rhipicephalus sanguineus (brown dog tick): 119405523
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Entry
119405523 CDS
T07382
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119405523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsan03041
]
119405523
03009 Ribosome biogenesis [BR:
rsan03009
]
119405523
Enzymes [BR:
rsan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119405523
Spliceosome [BR:
rsan03041
]
Complex A
U1 snRNP components
U1 related factors
119405523
Complex B
119405523
Ribosome biogenesis [BR:
rsan03009
]
Eukaryotic type
Pre-60S particles
Helicases
119405523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1796
Motif
Other DBs
NCBI-GeneID:
119405523
NCBI-ProteinID:
XP_037528285
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All DBs
Position
9:complement(51812780..51822156)
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AA seq
573 aa
AA seq
DB search
MINVERTSWTEPIPVPTSFYAPQQRNCHVTDATTLTPASCGQHKSLAHDPRHFSGIGGTD
QAAMLIPALFVVQFGVWQLNGPINGPNEGAPAENPPLVAPGAGGGLDTFGLGRGFFEKIP
LSGDSWKIIFMAAEEEGYQPLAATKDVYREHITTAERPIEEVEAYRQANDITVTGRDVPK
PILHVNEGGFPEHICKVIEARNSGSTLSAIEAQCWPVALRGKDLVAIIQDASKGKPLAYL
VPAIIHVMRQPVVLRGSGPLVLVVTATRVTALQVREIADELNAGSPIRTLYLQPGEPRQP
QLKQLVDGAHICVATPGRLVSFMEECQINLRCCTYLVLDEVDRMIMMGFEKQLRIIANNI
RPDRQTLVWLSSRSMDANRLIEDLTSEYVTVSIGAAAREDHKCQVQHDVIICETVEKEQK
LVALFNDILREESDKAVVFVERKQAVEDIVSFLRLQGWPAVGIHGKKTAYERDYALNSLK
FSKVPIMVATDVAACALAVDKVRLVVSYDYPSSASEYSRRAGYAARPDGRGVKYTFISPD
ETQRAKELISFLREAKQVIPPGLRMVANKIKGR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaaagaacatcatggaccgaacccattcccgtgccgaccagcttctac
gcacctcaacagcgcaactgccacgtcacagatgcgacaacactgacgccagcaagctgc
ggacagcataaaagcctagcccatgacccgaggcacttcagtggaattggcggcaccgac
caggcagcgatgcttattcctgctctttttgttgtgcagttcggagtgtggcaactcaat
gggccgatcaacggcccgaacgaaggagctcccgcagagaacccaccgctcgtcgctcct
ggggccggcggcggactagacaccttcggcctcggtcgaggcttcttcgaaaagataccg
ctgagcggcgactcgtggaaaattatctttatggcggccgaggaagagggctaccagcca
ctagccgcaacaaaggacgtctaccgcgaacacatcaccacggcagagcgacctatagaa
gaagtcgaagcgtaccggcaggccaacgacatcactgtcacggggcgcgacgttcctaag
cccatcctgcatgtcaacgaaggtggtttccctgaacacatatgtaaggtcatcgaggca
cgcaactctggctcaacgctcagcgcaatcgaagcgcagtgctggcccgttgcgctcaga
ggtaaagacctcgtcgccattatccaggatgcatcaaaagggaagcctctcgcttacctc
gtcccggcgatcatacacgttatgcgccagccggttgtgttgcggggctctggaccttta
gtcctggtggtcacagcgacgcgggtaacggccctacaggttcgggaaattgccgatgag
ctgaacgcggggtcaccgattcggacgttgtatctccagcctggtgaaccccggcaaccg
caactcaagcagctcgtggacggtgcccacatttgcgttgccacgccaggccgcctcgtg
tctttcatggaggagtgtcagataaacctgcgctgctgcacttacctggtactggacgaa
gttgaccgcatgataatgatgggcttcgagaagcagcttcgcatcattgcgaacaacatc
cgtcctgaccgccagacccttgtgtggctgtcctcccgctcaatggatgcgaaccggctg
atagaggatttgacgagtgaatacgtcactgtcagcatcggtgcggctgcccgtgaggac
cacaagtgccaggtgcaacacgatgtcatcatttgcgagacagttgagaaagagcagaaa
ctcgtagcccttttcaacgacatccttagagaggaaagtgacaaagccgtcgtgtttgtt
gaaaggaagcaagcggtcgaagatatcgtgtcctttcttcgcctccaaggttggcccgcc
gtcggcatccacgggaaaaagacagcgtatgaacgcgactatgcgctgaactccctcaaa
ttcagcaaggtgcccataatggtggcgaccgacgtggcagcttgtgctctagcagtggac
aaagtgcgtcttgtcgtgagctacgactacccgagcagcgcgagcgaatactcgcgccgc
gcggggtacgcggctcggcccgatggaagaggcgtgaagtacacgttcatatcgcccgat
gaaactcagcgtgccaaggagctgatatcgtttcttcgagaggccaagcaagttatacca
ccagggctaagaatggtagcaaataagatcaagggaaggtag
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