Rhipicephalus sanguineus (brown dog tick): 119406444
Help
Entry
119406444 CDS
T07382
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119406444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsan03009
]
119406444
Ribosome biogenesis [BR:
rsan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119406444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3snoRNP10
RVT_1
Motif
Other DBs
NCBI-GeneID:
119406444
NCBI-ProteinID:
XP_049276057
LinkDB
All DBs
Position
10:63840394..63997667
Genome browser
AA seq
1666 aa
AA seq
DB search
MAQTSLARQLQKLATPQTSLLKETKTRVSFLFDPREAAALDTDTAYAIGTTGLEELSTLN
EAFSHFEENLFSESAKFLERAVKSREENTILDGQIEQFLLLLSPHFLLRPAHKALEWLVY
RFHVHEYNVDALLRCILPFHETRVFARALQLLDLSSKTSKWHWLHCLQKPGLSLTKTALV
TQCARDPGALKFVCELLVAMTKVHSENTVALRPAIGLYASTVLGTLEAMKKITDQTVAML
LPYILKGLASSAIPDHRAATYLVVGQLARRTVLSRELSYELIVRVAKSMKAPGNSGASLS
GGLLCLLVLMTLQDIQEMPKAAFQALMKHKKSLVAALEELSSRHSVSAILKPLLARLIKS
VVESPQSENEDGSKTAAAVLKALIQLALSLDKYSDFVVRSFFDAYIKLHKSTMASGGDAA
SNPPNEEAILDIMKMLRQRCPDEVDACLESHLCGDDEQARLAAQQLTRSNAFGREHALVE
ATGSALFLALNSASKHHRVAAVRELVASLQKKQDVDEKFARDSLRSRLVDTEPEVVQAVL
ALGKDLCNFVEQSFVLSTLRRILFEPAEESTKWFDLRTRALAFVCDDLCTVVDEGQLLAA
LLPFLMPTEKSEMSLARVAYASRALQRFPMFKTVSTDKRMTAALGAEDLDTITELLLANI
AETVGKVEQPLALVKTLEELCFPSTGYAAAQLRCICGSLLNGLASSTKNVEVLREALRFY
QRLLAEKAACGEYEFAVAAVRDGRVPSTMVISGLTAVINGVKPVAALKENPMWVLKQQDE
ATHAALDILTDIFEMVAENSSIKSSCRLQFRQLLQKFFKVHCPSLEHQVHFLSGLWLLHL
DAYSSASSSDSQGAPATHQKERLQSLALAVSIQLLWGAEGIKWILAEKNLVFLSIILSLL
SPTQGIRDLAVSLVEASVACSHKGRSGLRALFELIANHAADVSVGTKKLLKLVASWNATL
KKPNTLLALLNHKQVPVAMRCGILTLVSRIDSKEVLEAAVKTDRDDAGLEARDIAATSPL
SSAEAQLLRECFAKYGLSAVSTPGRRRRSCGKFEKALRSTRGARGDGGLTWRSKWCQGFG
EEVPRKNQAALLDTLVDLASTRHPLFSIRQCSGHYVSPPKDRKDRKGQDNGLANLSQRRE
RCSCYDRRHRNVDPKRRGKSGEAHEGSPIVETPPLLTPTYCTCGRRGGDSRDAGNATSGT
ANSRLGSPSWLRRRKSTRNNWKELAQHMEYASRNPKHQAYLGILKTLLAKKETKSAAKQK
VHILIHNHPGEAEVIIKKGKEKFLGTQRKNNVHSRFDEYRGNPNTEMDRPFTLAEVERVL
SKLTRNTAPGNDRINNKTLRNLDGPSLDALLKYVNELWESGKVPPEWKHAEVIMIPKPNK
PITVKNLRPISLTSCAGKLYEHMVHNLLIEYLEDSGHVPKTMFRFRAHLSTQDVLLQIKE
KVIDKLDTHTQRAILDADVKGAFDNMSHEAILQHLNVYNCGEKVYNYIRAFLKERTATVG
IGHLRSEKFEIPPRDLQEDYKFCPPDTRNTLRHMVLQCTNDPDVPPSSAPSENEEEAGDR
YTASSYEISPDNIASHDFVVVPRLPHEEILLGDDFLRASTAVIDWGSESFAVSVPRRLRK
YFSNREPVKCLSVDAKDLFYNIPQDEVVSAAEENIDCYGNIKFHDE
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacttcgctcgcacggcagttgcagaagcttgcaacgccgcagacgtcgcta
ctcaaggagaccaaaacccgcgtctcgttcctcttcgatccccgtgaagcggctgccctc
gacactgacactgcgtatgccattggcactacgggcctagaggagctgtcaacgctgaat
gaggccttctcgcacttcgaggagaaccttttctcggagagtgccaagttcctagagcgg
gctgtcaagagccgggaagagaacaccatccttgatggccagattgagcagttcctgctt
ctcttgtcacctcacttcctgctacggccagcacacaaagccctcgaatggctggtttac
aggttccatgtgcacgagtacaacgtggacgcactcctccgctgcatactaccgttccac
gaaacgcgcgtctttgctcgcgccttgcagttgcttgacctgtcgagcaagacctccaag
tggcactggcttcactgtctccagaaacccggcctgtcgttgaccaagactgccctggtg
acacagtgtgcgcgagacccgggtgccctcaagtttgtctgtgaacttcttgttgccatg
acaaaggtacactctgaaaacaccgtggcactgcgtcctgccatcggtttgtatgcttcc
accgttctgggcacactcgaggcgatgaagaagatcacggaccagacggtggcaatgctg
ctgccgtacatcctgaagggcctggcatcttcggccattcccgaccaccgtgccgccacg
tacctcgtggttggccagctggctcggcgcacggttctcagccgagaattatcttacgag
ttgatcgtccgagtcgccaagagtatgaaggcgcccggcaactcaggtgcaagcctgtca
ggtggcctcctgtgcctattggtgctgatgaccctgcaagacattcaggaaatgcccaaa
gctgcatttcaagccctgatgaagcacaagaagtcactcgtagctgcgcttgaggagttg
tcgtccaggcattccgtgtcggccatcctgaagccacttctggcacggctgatcaagtct
gtggtggagtcccctcagagcgagaatgaggatggcagtaagacggctgcggctgtcctc
aaggctctaatccaactggccctgtcgctcgacaagtactccgactttgttgtgcgttcg
ttcttcgatgcctatatcaagctacacaagagcacaatggccagcggcggcgacgcggca
tcaaaccctccaaacgaagaagcaattctcgacatcatgaaaatgctgcgtcagaggtgc
cccgacgaggtggacgcctgtctggagagccacctttgcggagacgacgagcaggcgcgt
ctggcagcacagcagctgactcgctcaaatgccttcggtcgggagcacgccctggtggag
gccacgggaagcgcattatttctggctctcaacagtgccagcaagcaccaccgagtggca
gccgtgcgggaactggtcgcttctctccagaagaagcaggatgtggatgaaaagtttgct
cgagactcgttgcgcagccgcctggtagacacagagcccgaagtggtgcaggcagtgctt
gccctcggcaaggacctctgcaactttgtggagcagagctttgtcctgagcaccttgagg
agaatcctttttgaacctgcggaagagagcacgaaatggtttgaccttcgcactcgagca
ttggcgttcgtatgcgacgacctctgcactgttgtcgatgaggggcagctgcttgcagca
ctgcttccttttctgatgccaactgaaaagtctgagatgtcactcgcccgggtggcatat
gcaagccgtgccctccagcggtttccaatgttcaagactgtcagcactgacaagaggatg
acggctgctttgggagcggaggacctagacaccatcaccgaattgctactggctaacatt
gctgagactgtagggaaggttgagcagcccctggctctggtgaagacgctggaagaactg
tgcttcccgagcaccggatatgcagctgcacagcttcgatgcatctgtggctccctcctg
aatggcctggcatcctcgacgaagaatgtggaggtccttcgtgaagcgctccggttctac
cagcggctgctggctgaaaaggcagcttgcggcgagtacgagtttgcggtggctgcggtt
cgagacgggcgtgttccctccaccatggtcatcagtggcctgactgcagtcatcaacgga
gtaaagcctgtggcagcattaaaggaaaatcccatgtgggtgctgaaacagcaagacgag
gccactcatgctgcgttggacatccttactgacatttttgagatggttgcagagaattcg
agcatcaagagcagctgccggttacaatttcgccagctgctacaaaaattcttcaaggtt
cactgccccagccttgagcatcaggtgcactttttaagtggactctggctgctacaccta
gatgcctacagcagcgcttccagcagcgattcccagggggcaccggctacccaccagaaa
gagaggcttcagtctttggcccttgcagtttcgattcagttactgtggggtgcagagggc
atcaagtggatcctggccgaaaagaatcttgtgttcctgtccatcatcctgtcgctgctg
tcaccgacgcaaggaattcgagatttggctgtcagcctggtggaggcatcggtggcctgt
tcccacaagggacgctctggactccgtgccctttttgagctgatcgctaatcatgctgct
gatgtatctgtgggcaccaagaagctgctgaagcttgtagcttcctggaatgccacactg
aagaagcccaacacgctgctggcactgctgaaccacaaacaagttcctgtcgcgatgcgg
tgcggcatactgacactggtttcacgtattgattctaaggaagtgctggaggcagctgtg
aaaactgatcgcgacgacgctgggctcgaagctcgcgacatcgcagccacgtcgccgctg
tcttcggccgaggcgcaactcctcagggagtgcttcgcaaagtacggcttgagtgctgtt
tcaacgcctggccgacgtcgaaggagctgtggaaagtttgaaaaggcactccgcagcaca
agaggtgcgaggggcgacggtgggctaacatggcgctccaagtggtgccaaggatttggt
gaagaagtcccaaggaaaaaccaggcggccctgcttgacacactcgttgacctggcctcg
acacgccacccactgttcagcattcggcagtgctcagggcattacgtaagcccgccaaag
gaccggaaagatcggaaaggccaagataacgggctggcaaacctttcgcaaagacgagag
cgctgttcatgctacgatagacgacatcgaaatgtggacccgaaaagacgtggaaagagc
ggagaagcacacgagggtagtccaattgtcgagacacccccgttgttgacccccacctac
tgcacctgtgggaggcgcggaggggactcgcgagatgctggcaacgccacaagtggaacc
gcaaactcgagattgggatctccaagctggttgaggaggcgcaagagtactcggaacaac
tggaaagaactggcacaacacatggaatatgcttcaagaaaccctaagcaccaagcgtac
ctgggcatactcaagactctccttgccaagaaagagaccaagagcgcagcaaaacagaaa
gtacacatactcatacacaaccacccgggggaagcggaagtcatcatcaaaaaagggaag
gagaagttccttggtacgcagcggaagaataatgtacattcgcgctttgacgaatatcga
ggtaacccaaacaccgaaatggatcgacccttcacgttggcagaggtagagagggtcctc
agcaaactcacccgcaacacggcaccgggcaacgacagaataaacaataagacactccgg
aacctagatggaccatctctagacgctctcttaaagtatgtcaatgaactctgggaaagc
ggtaaagtcccaccggaatggaaacatgctgaagtaatcatgattcctaaacccaacaag
cccatcacggttaagaacttacgacctatttctctcacctcgtgtgctggaaaactctac
gagcacatggtgcacaacctcctgatcgaatatctcgaggacagcggacatgtcccaaaa
accatgttccgatttagagctcacctgtccacgcaagacgtcttactgcagatcaaggaa
aaagtcatagacaaattggacacgcacacccagagagccatcctcgatgcagacgtgaaa
ggggcttttgacaacatgtcgcacgaagccatactacaacacctgaacgtctataactgc
ggagaaaaggtgtataactacataagagcttttctgaaagagaggacagccacagtggga
ataggccacttgcgctccgagaagtttgaaataccaccgagggacctacaggaggactac
aagttttgcccaccggacacgcgcaacaccctgcgccacatggtgctgcagtgcacgaac
gatccggatgtaccaccgtcatcagccccaagcgaaaacgaagaggaagctggcgatcgt
tacacggcatcgtcttacgagatttctcccgacaacattgcttcgcatgactttgtcgtt
gttccccggttacctcacgaagaaatccttctaggcgacgacttcttgcgggcctcaaca
gccgtcatcgactggggctcggagagctttgctgtgtctgttcctcgaaggctacgcaag
tacttcagtaatagggaaccagtgaagtgcctatcagtagacgctaaagacctcttctac
aacattccccaggacgaagtcgtgtcggcagctgaggaaaatattgactgctatggaaac
atcaagttccatgatgagtga
DBGET
integrated database retrieval system
