Rhipicephalus sanguineus (brown dog tick): 119406858
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Entry
119406858 CDS
T07382
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119406858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119406858
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119406858
mRNA degradation factors
5'-3' decay
Decapping complex
119406858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
CBP_BcsO
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
DUF1186
Motif
Other DBs
NCBI-GeneID:
119406858
NCBI-ProteinID:
XP_037529540
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All DBs
Position
1:complement(212053561..212256142)
Genome browser
AA seq
1287 aa
AA seq
DB search
MNSHESSIDPNEATRLLKDILHVGKTPSVSSDAAMAANGSLDEALGGYGDPSDGAASAGN
LLESIFRSKEQPQDTQHQQHICLQDDEEDVSVDVCGTEVQVVVSRPRENASSSNRVKIKN
IVDYTWDLKYNYGKHICLHMSGTYLAYGLKAAASPVGVVRVLNLKTGDRLLIKGFRGHIR
DMAFARLATTVLLAIVDEFGTLCVYEIHENTTTLLLKVERPTDEVSSEYRRVVWCPYVPD
DGARGGNSAEDDNSKFLVATNHEEAEVWNVGHIESEDGSRTLTIPQVRAGLQRIIEHTKP
IIDAAFAPDGTALATAGADGQVRFFQVYMQDPDATPRCLHRWSPHNEKPVTCLFFLDNLK
ACNPDTQFWKFALTGSDSNTELKIWSCETWACLQTIRFIVSPGDVAPLPALKVEMDPSSC
YLVVSDIHRKVMYVGQVQQDTKAELVTLAAFPVVLPVLSFTVVEAVRCRFKPSTDTEHVN
RLDAEPQDADGAEEDHSSEKLQEGTMVRLHWMTTKSIQACHIVYPTKAISTGLSSAVSLS
TLSQHSAVSGCTDHLSDISADADDDERAGKSERNCDTPSSKAKEGRDDESSFAAAKLLLK
PSDFVSPSSTSTSLTPCTTAASTNTDPLPPTTSPGESTDPSTPVPSELCTIPVAASLPSP
GTSTSALDLSRKGVVEETAAFTAMSATANGHSEAVCELSEPPQRKLSQRSTASSSSQEVA
DIMAPAERLANAVDSSDEDDDDEEELEPGLGYDSAAEDLHSAAPAPTAGDPSISAASTCK
SQEVQDGGAWPQPPDTAKAFHTVTPTTLCKHAAGGDAPHVAEKSAAHAMGELELVISRLA
EETTALSKTVNSLSSQFREHHTVLVKLQEGQLYWDGLLSSLMAETRANLGSLGAVEAAIT
RLSEAQKSGIDKQASIVAQSLATMLGSHLEKSIANEFKNSVVPTVTKVIETTRCEISRRL
ETTEAVIRDTIIKAVKSKMMADTVAQAIGASVQSHVQGACREILQNTLIPSIDRICQNLF
LQLNETFQKGTREFLHQSQQHIEKQGEARASETMKNVESNVDRSLQTFLRDHKAALVPPD
FRAPLDEVVTSALHNLKAGLLQALAGQQEMLVNNLREEMHGALKETVAAAASEGIGSRSN
MNTPVPIADPHLVLQQITLLVRQGQYNMAFQQALSVADLSTVVSTCEMVSPAVVFGQHPC
PLQQPVLLSLIQQLCADLGASTEIKLKYLEEAVLSLDKENAVTKEHMKAILTQLCQKLNK
FLAGTPLHDMGRMAKRLLMVTQSSLAC
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcacgaaagttctattgacccgaatgaggccacaaggctgctgaaggatatt
cttcacgtggggaaaacgccatctgtttcctcggacgctgctatggcagccaacggcagt
ctggacgaagctcttgggggctacggggatccctcggatggtgcagcatccgctggaaac
ctcctggagtccatttttcgttctaaggaacagccacaggatactcaacaccagcagcac
atatgccttcaggatgatgaagaggacgtcagtgtagacgtgtgtggaacagaagtgcaa
gttgttgtcagtcggccacgggaaaatgcgagcagtagcaaccgggtaaagataaagaat
attgttgactacacctgggatctgaagtataactacggaaagcacatttgcctgcatatg
tctggaacatacttagcatatggtctcaaagctgcagcttcccctgtgggtgtagtgcgg
gtgctgaacctgaaaacaggcgaccgcctccttatcaaaggattcaggggccatattcgg
gacatggcctttgcccgtcttgcaaccacagtgctgctggcaatagtggatgagttcggg
acactctgtgtgtatgaaattcatgagaacactacaactcttttattgaaggttgagcgc
ccaactgatgaagtgtcaagtgaatatcgtcgcgtcgtgtggtgtccttatgtgccagat
gatggtgcaagaggtggcaacagtgctgaagacgacaactcgaaattcctagtggcaacg
aaccacgaagaggcagaagtatggaatgttggccacatagaaagtgaagatggatcgagg
acattgactatacctcaagttcgtgctggtcttcagaggatcattgagcacacaaagcca
atcattgatgctgcatttgcacccgacggcacagcacttgccactgctggtgctgatgga
caggtgcgcttctttcaagtttacatgcaggaccctgatgcaacacccaggtgccttcat
cgatggtccccacacaatgaaaaaccagtgacttgcttgttctttttggacaatctgaag
gcatgcaatccagacacacagttctggaagtttgcgctgactggttcagatagcaacact
gaactgaagatatggagctgtgaaacctgggcttgtcttcagactattaggttcattgtg
tcacctggagatgtggcaccattgcctgcattaaaggtggaaatggatccttcatcctgt
tacttagtagtgtccgacattcacagaaaggtcatgtatgttggccaggtacaacaagac
accaaggcagaactggtgactctagctgcgtttccggtggttctgcctgttctcagtttc
acagtggttgaagcagtgcggtgtcgcttcaagccatccactgacacagagcatgttaat
cgccttgatgcagagccacaggatgctgatggtgcagaggaggatcacagctctgagaaa
cttcaggaaggcacaatggtgcgcctgcattggatgacgacgaagtccattcaagcctgc
catattgtatatcctactaaggctatttctactgggctatcatctgcagtttctcttagc
acgctgtcgcaacactctgcagtgtctggctgcacagaccacttgtctgatattagtgct
gatgctgacgatgatgaaagggctgggaaaagtgagcgtaattgtgatactcccagcagc
aaagcgaaggaaggtagggacgatgagtcaagttttgcggcagccaaactcctgctcaag
ccaagtgattttgtgtccccatcaagcacttcaacttccttgacgccttgtactacagct
gcatccactaacactgacccactgccacccaccacatctccaggcgagagtactgatcca
tcaacaccagtgccaagtgagctgtgcactattccagtggcagcttcactcccctctcca
ggaacaagcactagtgctctagacctgtcgcgaaaaggggttgttgaagaaactgcagcg
ttcacagccatgtctgctacagccaatgggcattctgaagcagtctgtgaactgtcagag
ccacctcagcgcaagttgtcccagagaagcacagccagttcatcaagtcaggaggttgct
gacatcatggctcctgcagagaggcttgctaatgctgtagatagctcagatgaggatgat
gatgatgaggaggagttggagccaggcctggggtatgactctgcagctgaagacttgcac
tctgctgcacctgcgcctacagctggcgatccttctatctcggctgcatccacgtgcaag
agccaggaagtccaggatggtggtgcatggcctcaacccccagacaccgctaaagcattc
cacactgttacaccaaccacactgtgcaagcatgcggcaggaggtgatgcacctcatgtt
gcagagaaaagcgctgcccatgcaatgggcgagctggagcttgtgatctctcggcttgca
gaggaaactaccgcactttcaaagactgtaaattctctgagctctcaatttcgtgaacac
catacagtgcttgtgaagttgcaagaaggacagttgtattgggatggactgctatcgtcc
ctcatggctgaaaccagggcaaacctaggttctctgggggctgtagaagctgccattact
cggctaagtgaagcacagaagtctggcattgataaacaagcaagcattgtagcccagagc
ttggccaccatgcttggctctcacctcgaaaaatccattgccaatgaattcaagaactct
gttgtcccaactgtgacaaaggttattgaaacaacaaggtgtgaaatttctaggaggctc
gagacgactgaagcagtgatcagagataccattatcaaagcagtcaaaagcaagatgatg
gctgataccgtagctcaagctattggtgcctcagtacagtcacacgttcaaggggcgtgt
cgtgagattttacaaaataccctgattccatcaatagaccgcatctgtcagaacttgttc
ctgcagctcaacgagacctttcagaagggcacccgtgagtttctccatcaatctcaacag
cacattgaaaagcagggtgaagctcgtgcttctgaaaccatgaagaatgtcgagtcaaat
gtggaccgcagcctacagacctttttacgcgaccacaaagctgcactggttcctccagat
tttcgagctcctcttgatgaggttgtgacaagtgctctgcacaacctaaaggcaggactt
ctacaggcattggctgggcaacaggagatgcttgtgaacaatctgagagaagagatgcat
ggtgcactgaaagagactgtagccgcagctgcatctgagggaataggaagtcgctccaat
atgaacacaccggtgcctattgccgacccccatcttgtgctgcagcagattactcttcta
gtgcgtcagggccagtataatatggcttttcagcaggcactgtctgtggccgatctgtct
acagttgtgtctacatgtgagatggtgtcccctgctgttgtatttggccagcatccatgt
cctttacaacagccagtgctgctttcgctcatccagcagttgtgtgcagaccttggagcc
agcactgaaattaagttgaagtaccttgaagaggctgtgcttagcctggacaaagaaaat
gcagttacaaaagaacacatgaaagccatcctgactcagctgtgccagaagctcaacaag
ttcctcgcaggaacacctcttcatgacatgggacgcatggccaaacgtttgctgatggtc
actcagagctctcttgcctgctag
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