Rhipicephalus sanguineus (brown dog tick): 119406910
Help
Entry
119406910 CDS
T07382
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03013
Nucleocytoplasmic transport
rsan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119406910
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119406910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119406910
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119406910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
119406910
NCBI-ProteinID:
XP_037529618
LinkDB
All DBs
Position
10:complement(6779612..6844778)
Genome browser
AA seq
1524 aa
AA seq
DB search
MAGRPNRLNDDRERRLKPYERPRSMLQTVTSVVRHLLTPSWLSEPPSEPFNDQRPELING
EKESSVCTSLGSSPRSTRDCAVGPDGDLNEVPSPPMPATSRPETPLQRPLERPQERLQEQ
PLERTLGRLFEQPSERYDRPPERLSERPPERPLGQTFKRALERSPEQPTEWPLQPSQLRP
GASSSPSSRTSLVGTPSSVKRQKLWYEDSPMKSPFYSGQTTYGGAAAQNRLRMLATSQTP
TVPVMARGVKPGGATVGLSNTTRQILATLEKMATPVTEAKRVPLRSRIADGRSWTLPHRR
DPPAPTQGGPPVRSAARPSIRTVVPPRTEMSRLEVSRKESTAAESSWADSLKAKVSRPET
GKPEVPSVEAAKQYPLRKTEEPSVETSSVTVAPVAKPNSVTSAWEPPSNRSAPDRAPGGG
KMVRVIHTAHPAPLKMSGSPSEPEEELPPAVPLPPIQRLPTFSFNLKPPQSLPATPSTTL
ASNSNGKTSGGSISSGLVSSSPVTSSSVSSSALNSNAFSSIPVSSSVVNSSAFSPSTIKS
STVKSSAISSGLVGTGPIGTNIVSSGPVSSNPVSSSTVSSSLVTSSLVRSGPISSIPTSS
IPTSTNPVGALSVTEFTFSKPKPLASSSAALVAQPQRDQLYEFSEPWGPHGDEEQQEEKL
PDEAGHGLKKPREAMQVDPPNKSVPEVDAETKEPENATAKNDKDSKNSVKDGGDLWERFK
PAAGSWSCSVCMITNAASANCCQACETPRPGAAPKAAAAPTSVPSSAPAPVAPLPISVAT
AASRWECSTCLVRNETSATRCCACETLRPSAGSATAGATPSVVASGSLWECDTCLVRNQP
TAVRCCACENPRPSASTATLSSAQAAAATFNFKLPSSEPSGFGGAPFAAAPMQFKFGIPS
SGSAKPSEGAPSSESAAKPLKFGIPSTTTVTSAATKPTTSTTAAAPLKDFKFGSSSEEPS
KAISFGSSASEASKAFKFGTSSEESATSFKFGTTTNEPTTKPLNFGATASEQHTKSFTFG
ASSEEPTKRAKPSTTTEEAAKLFNFGSSSDQPSKPLKFGCTAPEPAKDPQTGSGTEVSTK
AFKFGATTDEPTKSSPIASSAEGASGGFKLGHMAEPSKGFPFASTTVKEPVKPFKFGTTP
STETATGGFKFGSTAEEPAKSVKPGSSEEQQPAAKTFKFLAPSGPAEPPKLFQFGMTAEQ
TPKLGAPVDTPAKPFSFGTPATTAGAAEAAPKQFSFGLAAKPSEMSAPTVTAQQPSIVPQ
GGSQTTTSGQLPGFLAPATTAPAAATPTIEPAKPAFPTSQFVFGQKTDASAATFSFGSQP
TPAFPQPASGASAPLPSFGTLTGKPPEPHVAAQQPTFGIGATPTPAFGALNPLKPAATPA
VAPTATSMPSGFGCQQPTPSTGFGLPAATVPTQPSFIFRPPTAAPPVTFQFGSTGPTSGG
VFRFGAQPSQPATPLQQQPQQQQPALEPFGAPFGQTPPMQFGMSPSPLFPGPDSENPFNA
TSGSSGTTQQRRIRKAIRRKPTPR
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagacccaaccgccttaacgatgacagggaacgtaggctgaaaccttacgaa
agacccaggtctatgctgcaaactgtgacatcggttgtgcggcacctgctgacaccgtcc
tggctgagtgaacccccatctgagcctttcaacgatcaaagaccagagctgataaatggt
gaaaaagagtcatctgtttgtacatccctggggtcctcgccacggtcaacacgagactgt
gctgtgggaccagacggtgatcttaacgaggtgcccagcccccccatgcctgcgacatca
cggccagagacgccattgcaacgacccctggaacggcctcaagagcggctgcaggagcag
ccattggaaagaacgttaggaagactatttgaacagccgtcggaacgatatgaccgacca
ccggaacggttatcggaacggccaccggaaaggccactgggacagacgttcaagcgtgct
ttggaacggtctccagagcagcccactgagtggccattgcagccgtcgcagctgcggcca
ggggcttcatccagtcccagcagcagaacaagtctcgttggaacacctagctccgtcaag
agacaaaaactctggtatgaagatagccccatgaaatcgcctttctactctggtcagaca
acgtatggcggagctgcggcccaaaacaggctacgaatgttggcaacgtcacagacacct
acggtcccagtcatggcccgaggtgtgaagccaggaggagcaacagttgggctcagtaac
actactcgccaaatcctggctaccctggagaagatggcaactcctgttacggaggccaag
cgtgtaccgctgaggagcaggatagcagatggccggagttggactctcccacaccgcaga
gatccccctgcaccaacacagggtgggcctccagtcagaagtgcagctaggccatctatt
cgaacggtagtgccacctcggacagagatgtctcgattggaggtctctcggaaggaaagc
actgcagctgaatcctcgtgggccgattccctcaaggcaaaggtgtctcggccggaaact
ggcaaacctgaagtgccttcggttgaagctgccaagcaataccctctgagaaaaacagag
gaacccagtgttgaaacaagtagtgtgacggtggctcctgtggccaaaccgaactcggtg
acttctgcttgggaacctccgtctaatagatcggcccctgatcgtgctccaggaggaggc
aagatggttcgtgttatccacacagcccacccggcaccactgaagatgagtggctcaccg
tcggaaccagaggaagaactcccacctgcagtacctcttccgcccatccagaggcttcct
acgttctccttcaacctcaaaccaccacaatcactgccagcaacaccatcgaccaccctc
gcaagcaacagcaatgggaagacaagcggtggaagtatcagttctggccttgtaagctct
agccccgtcacctctagttctgtcagctctagcgccctgaactctaacgccttcagctct
atccccgtcagctctagcgtcgtgaactctagcgccttcagccctagcaccatcaagtct
agcactgtcaagtctagtgccatcagctctggccttgtaggcacgggccccataggtacc
aacattgtaagctctggccctgtcagctccaaccctgtcagctccagcactgtcagttcc
agccttgtgacctccagccttgtcagatctggccccatcagcagcatccccaccagtagt
atccccaccagcaccaaccctgttggtgcgctctctgtcacagagttcacattcagcaag
ccaaagccattggccagctctagtgctgcattggtggcacaaccccagagagaccagtta
tacgagttctctgagccttggggaccacatggcgatgaggaacagcaggaagaaaagctg
cctgatgaagcaggtcatggactgaagaagccaagagaagccatgcaggtggatcctcca
aacaagtctgtgccggaggttgacgcagagaccaaagagccagagaatgccacggccaaa
aatgacaaggacagcaagaattccgtaaaagatggtggggacctgtgggaacgtttcaag
ccagctgccgggagctggtcgtgttcggtgtgcatgatcaccaatgcagcctcggcaaac
tgctgccaagcctgcgagacgccgcgtcctggtgctgctcccaaagcagcagcagctccc
acaagtgtcccttcttcagcgcccgcccccgtggccccgctgcctatcagtgttgccacc
gcagcctcacgctgggagtgcagcacatgcctggtgagaaatgagaccagtgccactcgt
tgctgtgcctgcgagactcttcggccgtcggccggcagtgctacagctggtgctacacct
tccgtggtggccagtggatccctttgggagtgtgacacgtgcctggtcagaaaccaacct
actgcagtgcgttgttgtgcctgcgagaatcctcggccgtcggccagcactgccactctt
tcctcggcgcaggcggctgcagcgaccttcaatttcaagctgccttcctctgagcccagt
ggtttcggaggagcgccctttgctgcggcgcccatgcaattcaagtttggcataccttcg
tcgggctctgcaaagccatccgaaggtgctccttcctcggagagtgcggcgaaaccgctc
aaatttggcattcctagcactaccactgttacaagtgccgctaccaagccaacgacttct
actacagctgcggcacccttaaaggacttcaagtttggttcttcctcggaggaaccatca
aaggccatcagtttcggttcatcagccagtgaagcatcaaaggcattcaagtttggcacc
agctctgaggagtctgcaacgtctttcaagtttggcaccactactaacgagcccacaaca
aagccacttaattttggcgcaacggcatctgaacaacacacaaagtcatttacgtttggt
gctagttcagaggagccaacaaaaagagccaagccaagcacaactacagaagaggctgca
aagctgttcaacttcggttcgtcctcggatcaaccctcaaagcctctcaagtttggctgc
accgcacctgagccagccaaggatcctcagactggaagtggcacagaagtttctacaaag
gctttcaagtttggtgccaccacggatgagcctacaaaatcgtccccaatagccagctct
gcggagggtgcatcgggcggcttcaaacttggccacatggcagagccaagcaaaggattt
ccttttgcgtctactactgtcaaggaaccagtaaagcccttcaagtttggcaccacccct
tcaacagagacagccactggaggcttcaagtttggctctactgcagaggagcccgcaaag
agtgtcaagcctggctcctccgaagaacagcaaccggctgcaaaaactttcaaattcctt
gccccgtcgggtcccgccgaaccacccaagctgtttcaatttggcatgactgcggagcaa
acaccgaaattgggcgcacctgtcgacactcccgctaagcctttcagtttcgggacgccc
gcaactacagcaggagcagcagaggcggcaccaaagcaattttcgttcggcttggcagca
aagcccagcgaaatgtcagcccccacagttacagcacagcagccatctattgtgcctcag
ggaggcagtcagaccaccacttctggacagctgcctggcttcctagcaccggccactact
gcacctgcggcagcaacgccgaccattgaacctgcaaagccggctttcccaacttcgcag
tttgtctttggccagaaaactgacgccagcgctgccaccttttcgtttggctcccagcct
acaccggcttttccccaaccggccagtggtgcatctgctcctttgccatcttttggcacc
ctgacaggcaagcccccagagccacatgtggcagcacagcagccgacgtttggcattggg
gcaacacccactcctgcttttggtgccctgaaccctctcaagcctgctgccacccctgca
gtagcacctacggccaccagcatgccaagtggctttggttgccaacagccgacacccagt
actggatttgggctgcctgcagcgactgtccctacccaaccgtcgttcatttttcggcca
ccaacagctgcaccgccagtgaccttccagtttggcagcactggcccaacctcgggtggc
gtcttccgctttggagctcagcccagccaaccagccacgcctctgcagcagcagccacag
cagcagcagccagcccttgaacctttcggggccccgtttggccagactccccccatgcag
tttggaatgtcaccctcgccacttttccccgggccggattccgagaacccgttcaacgcc
accagtggcagcagcggcactacgcagcagcgtcgcattcgcaaggccattcgacgaaag
cccacgccgcggtag
DBGET
integrated database retrieval system
