Rhodoferax saidenbachensis: RS694_02445
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Entry
RS694_02445 CDS
T04623
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rsb
Rhodoferax saidenbachensis
Pathway
rsb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RS694_02445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsb03021
]
RS694_02445
03400 DNA repair and recombination proteins [BR:
rsb03400
]
RS694_02445
Enzymes [BR:
rsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RS694_02445
Transcription machinery [BR:
rsb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RS694_02445
DNA repair and recombination proteins [BR:
rsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RS694_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
APW41525
UniProt:
A0A1P8K699
LinkDB
All DBs
Position
498986..503212
Genome browser
AA seq
1408 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDFDAKFKEYGDEFQAKM
GAEGIKDLLQSIDIEGSIEKLRNDLTGSELKIKKNAKRLKVLEAFKKSGIKPEWMVLDVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFARLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEART
LMLASNNVLFPANGEPSIVPSQDVVLGLYYTTRDRINGKGEGLIFSDTGEVQRAFDGGAV
DLNSRINVRLTEWTKNKETGEFEPSTKLWETTAGRALLSEILPKGLPFSNINKALKKKEI
SKLINVSFRKCGLKETVVFADKLLQAGFRLATRAGISICIDDMLVPAEKHDIIARAQKEV
KEIEQQYVSGLVTSGERYNKVVDIWGKSGDEVSKVMMAKLSKEMVTDRHGKQVQQESFNS
IYMMADSGARGSAAQIRQVAGMRGLMAKPDGSIIETPITANFREGLNVLEYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTEQDCGTHSGYLMRAIVEGGETIESLRDRILG
RTAADDVLHPETRAVLADAGAMLDEDLIEELEAAGVDEVKVRTALTCETRFGICAKCYGR
DLGRGGLINHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGSIGFN
ATMRYVTNSKKELVVIARSGEIVIHDEHGRERERHKVPYGAILTVKADQVVKAGAILANW
DPLTRPIITEFAGKAHFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGATKVVRPQVKLI
DASGHEVKIPGTDHSVTIGFPVGALVQVRDGMDVGPGEVLARIPIEGQKTRDITGGLPRV
AELFEARSPKDKGVLAEVTGTVSFGKETKGKVRLQITDPEGKVWEELVPKEKNILVHEGQ
VVNKGESVVDGPADPQDILRLLGSEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVEAAGDSSYINGEQVERSEMLNTNDALRAAGKIPAVFTNLLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHEARKVRESMDDAERRA
IAEAEAADLAGDAEAVGETQANEGTASE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttactcgacctgttcaagcagttcacgcccgatgagcatttcgatgccatc
aagatcggtatggcttctcccgagaagatccgttcgtggtctttcggcgaagtcaaaaag
cctgaaaccatcaactaccgcacgttcaagcctgagcgcgacggcctgttctgcgccaag
atcttcgggcccatcaaggactacgaatgcctgtgcggcaagtacaagcgtttgaagcac
cgcggtgtgatctgcgagaagtgcggcgttgaagtcacacagaccaaggttcgccgtgaa
cgcatgggtcacatcgacctggctgctccttgcgcccacatctggttcctgaagtccctg
ccaagccgtctgggtctggtgctggacatgacactgcgtgatatcgaacgcgtgttgtac
tttgaagcctacgtggtcaccgacccaggcatgaccccgctgaagaagttcagcatcatg
tcggaagacgatttcgacgccaagttcaaggaatacggcgacgagttccaggccaagatg
ggcgctgaaggtatcaaggatttgctgcaaagcattgatatcgaaggttcgatcgaaaag
ctgcgcaacgacctgaccggttccgagctcaagatcaagaaaaacgccaagcgtttgaag
gttctggaagcgttcaagaaatccggcatcaagcccgagtggatggtgctggacgtgctg
ccagtactgccaccggatttgcgtccgctggtgccgctggacggcggtcgttttgcgacc
tctgatctgaacgatctgtaccgccgcgtgatcaaccgcaacagccgtctgcgccgtttg
ctggaactcaaagcgcctgaaatcattgcgcgcaatgagaagcgcatgttgcaagaagcc
gtggacagcttgctggacaacggtcgccgcggcaaggccatgacgggcgccaacaagcga
gctctgaagtctctggccgacatgatcaagggcaaatccggtcgtttccgccagaacttg
ctgggcaagcgcgtggattactccggtcgttccgtgattaccgtgggcccaacgctcaag
ctgcaccagtgcggcctgccgaagctgatggccttggaattgttcaagcccttcatcttc
gcgcgcctggaagccatgggcattgcgaccacgatcaaggctgccaagaaggaagtcgaa
tccggtacgcccgtggtttgggacattctggaagaggtcatcaaagagcatcccgtgatg
ctgaaccgtgcgcctacgttgcaccgtttgggtatccaggcctttgagcccatcctgatc
gaaggcaaagcgatccaactgcacccactcgtttgcgcggccttcaacgccgacttcgac
ggtgaccagatggctgttcacgtgcctttgtcggtggaagcacaaatggaagcccgcacc
ttgatgctggcctccaacaacgtgctgttcccggccaacggcgagccttccattgttcct
tcgcaggacgtggtgttgggtctgtactacaccacccgtgaccgtatcaacggcaagggc
gagggcctgatcttctccgacaccggtgaagtgcagcgcgccttcgacggtggtgcagtc
gacctgaactcgcgtatcaacgtgcggttgaccgagtggaccaaaaacaaggaaaccggc
gaatttgagccatcgaccaagctgtgggaaaccaccgcaggccgtgcgctgttgtccgaa
atcctgcccaagggtttgcctttctccaacatcaacaaggcgttgaagaagaaggaaatc
tccaagctgatcaacgtgtcttttcgcaagtgcggattgaaagagaccgtggtgtttgcc
gacaagctgttgcaagcgggcttccgcctggcgacacgtgccggtatctccatttgtatc
gacgacatgctggtgcctgcagaaaaacacgacatcattgcgcgcgcccagaaggaagtc
aaagagatcgaacagcaatatgtgtccggtctggtgacttccggtgagcgctacaacaag
gtggtggatatctggggcaagtcgggtgacgaagtgtccaaggtgatgatggccaagctg
tccaaggaaatggtcacggaccgccatggcaagcaagtccaacaagagtccttcaactcc
atctacatgatggccgactccggcgcgcgcggttctgcggcgcagattcgccaggtggcc
ggtatgcggggtctgatggccaagcctgacggctccatcatcgagacaccgattaccgcg
aacttccgcgaaggtctgaacgtgctggagtacttcatctccacccacggtgcccgtaag
ggtctggccgatacggcgttgaagacggcgaactccggctacctgacacgccgcctggtc
gacgtgacgcaggatctggtggtgaccgagcaggattgcggtacccacagcggttacctc
atgcgcgctattgttgaaggtggtgaaaccatcgaatccctgcgcgaccgcattctgggt
cgtacagcagcagacgatgtgttgcaccctgaaacacgtgcggtgcttgccgacgccggt
gccatgctggatgaagacctgatcgaagaactcgaagcagcgggcgtggacgaagtcaag
gtgcgcaccgccctgacctgcgaaacccgttttggtatctgcgccaagtgctacggacgc
gatttgggtcgtggcggtctgatcaaccacggcgaagccgtcggtgtgatcgctgcacag
tccatcggtgagcctggtacccagctgaccatgcgtaccttccacatcggtggtgccgct
tcgcgtgccgctatcgcctccagcgtagaagccaagtccaacggcagcattggcttcaac
gccacgatgcgctacgtgaccaacagcaagaaagagctggtcgtgattgcccgttccggt
gaaatcgtgatccacgatgaacacggacgtgagcgtgaacgccacaaggtgccgtacggc
gccatcctgacggtcaaggccgaccaggttgtcaaggccggcgccattctggcgaactgg
gatccgctgacccgccccatcattaccgagttcgccggcaaggcgcatttcgagaatgtg
gaagaaggcctgacggttgccaagcaggtcgatgaagtgaccggtctgtccacattggtg
gtgattgatccgaagcgccgtggtgctaccaaggtggtgcgtccgcaggtcaagctgatc
gatgcttctggtcatgaagtgaagatccctggtaccgatcactcggtgaccattggcttc
cccgtgggagcgctcgtgcaggtgcgtgatggtatggacgtcggccccggcgaagtgctg
gcccgtatccctatcgaaggtcagaagacccgcgacattaccggtggtctgccccgtgtg
gccgagctgttcgaagcccgttcccccaaagacaagggcgtcctcgccgaagtcacgggc
acggtctcctttggtaaggaaaccaaaggcaaggttcgcttgcaaatcacggatcccgaa
ggcaaggtctgggaagaacttgttcccaaggaaaagaatatcctggtgcacgaaggccag
gtcgtcaacaagggtgagtccgtggttgacggtccagcagatccacaggacatcctgcgc
ttgctgggttccgaagaactggcccgctacatcgtggacgaagtgcaggacgtttaccgt
ttgcaaggcgtgaagatcaacgacaagcacattgaagtgattgttcgccagatgttgcgc
cgtgtggtggtggaagctgcaggtgactccagctacatcaacggagaacaggtcgagcgt
tccgagatgctcaacaccaacgacgccctgcgtgccgctggcaagatcccggccgtcttt
accaacctgctgctgggtatcaccaaggcgtctttgtccaccgacagcttcatcagcgcg
gcttccttccaggaaaccacccgcgtgttgaccgaagctgccatcatgggcaagcgcgac
gagctgcgcggactgaaggaaaacgtcatcgttggacgtctgattccagccggtaccggc
atggcataccacgaggcccgcaaggtgcgcgaaagcatggacgacgccgagcgccgagcc
attgccgaagccgaagcggccgatctggcgggtgatgctgaagccgtgggcgaaacccaa
gccaatgaaggtactgcaagcgagtaa
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