Rhodoferax saidenbachensis: RS694_08430
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Entry
RS694_08430 CDS
T04623
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rsb
Rhodoferax saidenbachensis
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsb03009
]
RS694_08430
Enzymes [BR:
rsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RS694_08430
Ribosome biogenesis [BR:
rsb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RS694_08430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_31
TRAM
Methyltransf_25
PCMT
MTS
Motif
Other DBs
NCBI-ProteinID:
APW42551
UniProt:
A0A1P8K972
LinkDB
All DBs
Position
1762087..1763559
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AA seq
490 aa
AA seq
DB search
MTDAILTVPTTTSPADNALPEGWLAVKSLDLEAQGVAHRPDGKVVFIDGALPFEVVSANI
HRSKSSFEKGTLTQIHRESSQRVRPDCPHFGLSPQSCGGCKMQHLHIGAQVAVKQRVLED
NLWHIGKVKPGNMLRPIEGPTWGYRYRARLSVRFVRKKGEVLIGFHERKSHYVADIKECR
VLVPHVSAMLLPLRALIASMDAIETLPQIELAVGDMGLGAAEVTAMVLRHMEPLSEADLN
RLRQFAVAHPGVQWWLQSKGPDTVKRLDELPGHETGQLAYTLPQFGITMPFRPIDFTQVN
PHINRVLVQKALALLQVEKTERVIDWFCGLGNFTLPLATQAREVLGVEGAESLVARSREN
LTFNRSQAQAGIALAATEFVARNLFEMTPELLVGDGAADKWLVDPPREGAFSLVQALAAL
KQSPELRGALGAGWTPPKRIVYVSCNPATLARDAGVLVQEAGYCCAAAGVVNMFPHTAHV
ESIAVFELEA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcaattttgaccgttcctacgacaacttcccccgcagacaacgccttgccc
gaaggctggctggccgtgaaatccctggacctggaggcgcagggcgtggcccaccgtccc
gatggcaaggtggtatttatcgacggcgccttgccctttgaggtggtgagcgccaatatc
caccgcagcaaaagcagctttgagaaaggcacgctgacccagatccaccgcgagtcttcg
cagcgcgtgcgcccggactgcccgcacttcggtctgagcccccagtcctgtggcggttgc
aagatgcagcacctgcatattggcgcccaggtggcggtcaagcagcgggtgctggaagac
aacctgtggcacatcggcaaggtcaagcccggcaatatgctgcggcccatcgaggggcca
acctggggctaccgctaccgggcgcgcctgtcggtgcgttttgtgcgcaagaagggcgag
gtgctgatcggtttccacgagcgcaagagccactatgtggccgatatcaaggaatgccgg
gtgctggtgccgcacgtcagcgccatgctgctgccgctgcgcgcgctgattgcctccatg
gacgccatagagacgctgccgcagattgaactcgccgtgggcgacatgggactgggcgcg
gcagaagtgacggccatggtgctgcggcacatggagcccttgagcgaggccgatctgaac
cgcctgcgccagtttgccgttgcgcacccgggcgtgcagtggtggttgcagtccaagggg
ccggacacggtgaaacgcctggacgagctgcccggccatgagactggccagttggcctac
acgctgccgcagtttggcatcaccatgccgtttcggcccatcgacttcacgcaggtcaat
ccgcatatcaaccgcgtgctggtgcaaaaagcgctggcgctgttgcaggtggaaaagaca
gagcgtgtgattgactggttctgcggtctgggcaacttcacactaccgctggccacccag
gcgcgtgaggtactgggtgtggagggcgccgaatcgctggtcgcccgttcgcgtgaaaat
ctgacgttcaatcggtctcaagcccaggcagggattgcgctggcggctactgaatttgta
gcgcgtaacctgtttgaaatgacaccggagttgctggtgggtgacggcgccgccgataag
tggctggtcgacccgccgcgggaaggcgcattttcgctggtgcaagcgctggcggccttg
aaacagtcacctgaactgcgtggagcgttaggtgccgggtggacgccgcccaagcgcatc
gtttacgtgagttgcaacccggccacgctggcgcgtgacgcgggtgtgctggtgcaggag
gcgggctactgctgcgcggcagcgggggtggtcaacatgttcccccacacggcgcacgtg
gagagcattgcggtgtttgagctggaggcttga
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