Rhodoferax saidenbachensis: RS694_10160
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Entry
RS694_10160 CDS
T04623
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rsb
Rhodoferax saidenbachensis
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsb03016
]
RS694_10160
Enzymes [BR:
rsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RS694_10160
Transfer RNA biogenesis [BR:
rsb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RS694_10160
Prokaryotic type
RS694_10160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
APW42860
UniProt:
A0A1P8KA32
LinkDB
All DBs
Position
2133101..2134084
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AA seq
327 aa
AA seq
DB search
MQAAPRARVARRPVHGVLLLDKPIGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPL
CFGAATKFSQMHLDADKAYETVLRLGVKTTTADAEGDVISERPVQFTAEMLDEVVRRFTG
PIRQIPPMHSALKKDGKALYEYARAGIEVERAPRDVTIRALKVLENRMDNAQPAIKMVVE
CTKGTYIRTLGEDIGEALGCGAHLSALRRIRTGGFDTTQCVTLEALEAMSEAERMACLLP
VDALLAGHSVVTLDSENAGRFLSGMRRRGPWPDASEVAVYAAGTNSLLGTAHVKAGELIP
VRLLSPLEISETLAQQQVIEQLAESEI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcagcgccacgtgcacgggttgccaggcgccccgtgcatggggtgctgttgctg
gacaagcccatcggtttgtcgagcaaccaggctttgcagaaagccaaatggcttctacgt
gccgagaaagcgggccataccggcacgctggaccctctggcgactggcgtattgccgctg
tgttttggtgcagcgaccaagttcagccagatgcatctggatgcggacaaggcctatgaa
acggtgttgcgcttgggcgtgaaaaccacaacggcagatgccgaaggtgatgtgatcagt
gagcggcctgtgcagttcacggcggaaatgttggatgaagtggtgcgccggtttaccgga
cccatacgccagattccgcccatgcacagtgcgctgaagaaagacggcaaggccctgtac
gagtacgccagggccggcatagaagtagagcgggcaccgcgggatgtcacgattcgggca
ttaaaagtgcttgaaaaccgcatggataatgcgcaaccagctatcaaaatggtagtggag
tgtaccaagggaacgtatatccgtaccctgggtgaagacatcggtgaagcgctgggttgt
ggtgcgcatttgagcgcactgcgccgcattcgcaccggtggtttcgataccacgcagtgc
gtgacgctggaagcgctggaggccatgagcgaagccgagcgcatggcctgcctgctaccg
gtggacgcgctgctggcgggacacagcgttgtcacgctggacagtgagaatgcaggacga
tttttgagtggaatgcgcagacgcggcccctggcccgatgcgagcgaagtcgcggtgtat
gcagcgggcacgaacagcctgctgggcaccgcccatgtgaaagcgggggagttgatcccg
gtgcggctcttgagcccgctggagatcagtgaaacgctggcacagcaacaggttattgaa
cagttagcagaaagtgaaatatga
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