Rhodoferax saidenbachensis: RS694_11105
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Entry
RS694_11105 CDS
T04623
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rsb
Rhodoferax saidenbachensis
Pathway
rsb00071
Fatty acid degradation
rsb00280
Valine, leucine and isoleucine degradation
rsb00310
Lysine degradation
rsb00362
Benzoate degradation
rsb00380
Tryptophan metabolism
rsb00410
beta-Alanine metabolism
rsb00640
Propanoate metabolism
rsb00650
Butanoate metabolism
rsb00907
Pinene, camphor and geraniol degradation
rsb00930
Caprolactam degradation
rsb01100
Metabolic pathways
rsb01110
Biosynthesis of secondary metabolites
rsb01120
Microbial metabolism in diverse environments
rsb01200
Carbon metabolism
rsb01212
Fatty acid metabolism
Module
rsb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RS694_11105
00650 Butanoate metabolism
RS694_11105
09103 Lipid metabolism
00071 Fatty acid degradation
RS694_11105
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RS694_11105
00310 Lysine degradation
RS694_11105
00380 Tryptophan metabolism
RS694_11105
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RS694_11105
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RS694_11105
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RS694_11105
00930 Caprolactam degradation
RS694_11105
Enzymes [BR:
rsb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RS694_11105
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RS694_11105
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RS694_11105
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
APW43026
UniProt:
A0A1P8KAJ2
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All DBs
Position
2320929..2323088
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AA seq
719 aa
AA seq
DB search
MKTIQYSLADGIATITFDEPNSPVNTMCLQWQEDMSAVTAQVLKDKDAIKGILLASAKST
FFAGADLKAAMRLKPSDATTAFTEIEHLKKNMRTIETLGKPVVSLLNGTALGGGWEVALM
GHHRIAIDDRKIQFGLPEVSLGLLPGASGVTKMTRHLGLMGAQPYLVEGKLFSPADAKGL
GLVHDLVAPGDNAAAEMKTKALAWIAANPTAQHPWEVKGYKVPGGLPSNPAVAQMLPVAP
AMIKKQTRGLYPAPEAIMACMVEGLQVDIETALRIESRYLAKLMTGTNAKAMINTFFFNL
NAIKSGTSRPAGVPKFKPTKVGLLGAGMMGAGIAYSQASKGIATVLKDVSQEKADTGKGY
AAKITQGRVDKGRMKPEAQAEILGRIQATASNDDLKGCDLIIEAVFENRELKAKVTQETE
PLLAPGGFFASNTSTLPITGLAKASRDAKKFIGIHFFSPVDKMQLVEIIKGKETDDETVA
RAYDYVQALGKFPIVVNDSRGFFTSRVFGTFVMEGAAMLGEGIPAAAIENAGIQCGMPVG
PLAVLDETALTLSLHVMDQTKKDFEAEGKTYTATPGELVVEKMVKQHSRPGRAGGAGFYE
YPTDKAVKKFLWPELKGLFEKADANWNITDLKDRLLYRQAVETARCLSENVLTSVHDANI
GSIFGIGFPAWTGGAMQFIYGIGVDAFEARAAELAKAYGPGFALTAEVKAAIRKYQPVY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatccaatactccctggctgacggcatcgccaccatcacctttgacgaaccc
aactcgcccgtgaataccatgtgcctgcagtggcaggaagacatgagcgcggttaccgca
caggtgctcaaggacaaggacgccatcaagggcatcctgctggcctccgccaagtccacc
ttctttgcaggcgccgacctgaaggctgcgatgcgcctcaagccgtcggacgcgaccacc
gcgttcacggaaatcgagcacctgaagaagaacatgcgcaccatcgagaccctgggcaag
cccgtggtcagcttgctcaacggcacggcgctgggcggcggctgggaagtggcgctgatg
ggccaccaccgcattgccatcgatgatcgcaagatccagttcggcctgcctgaagtctct
ctgggtctgctgcccggtgcctccggcgtgaccaagatgacacgccacctgggtctgatg
ggcgcgcagccttacctggtcgaaggcaaactgttttcgcccgcagacgccaaaggcctg
ggcctggtgcacgacctggtcgcgcccggcgataacgccgcggcagaaatgaaaaccaag
gcactcgcctggattgccgccaaccccaccgcgcaacacccgtgggaagtcaaaggctac
aaggtgcccggcggcttgccatcgaaccccgccgtggcgcagatgctgcccgtggcacca
gccatgatcaagaaacaaacgcgtggcctgtaccctgcgccagaggccatcatggcctgc
atggtcgaaggtttgcaagtggatatcgaaaccgcgctgcgcatcgagagccgttacctc
gccaagctgatgaccggcaccaatgcgaaggcgatgatcaataccttcttcttcaacctc
aacgccatcaagagcggcaccagccgccctgccggggtgccgaagttcaaacccaccaag
gtgggcctgctgggcgccggcatgatgggcgcaggcattgcctattcgcaagccagcaag
ggcattgcgacagtactgaaggatgtgagccaggagaaagccgataccggcaagggctac
gccgccaagatcacccagggtcgcgtcgacaagggccgcatgaagcccgaggcacaagct
gaaatcctgggccgcatccaggccacagcgtcaaacgacgacctgaagggttgcgacctg
atcatcgaagccgtgttcgagaaccgcgagttgaaagccaaggtcacgcaggaaaccgaa
ccactgttggcacccggcggcttcttcgcctccaacacctccacgctgccgatcaccggc
ctggccaaagctagccgcgatgcgaagaaattcatcggcatccacttcttcagcccggtc
gacaagatgcaactggtggaaatcatcaagggcaaggagaccgatgacgagaccgtggcg
cgcgcctacgactacgtgcaggcgctgggcaagttccccatcgttgtcaacgactcgcgc
ggcttcttcaccagccgcgtgtttggcacctttgtgatggaaggcgccgcgatgctgggc
gaaggcatccccgccgccgcgattgagaacgccggcatccagtgcggcatgcccgtcggc
ccgctggccgtgctggacgaaaccgccctcaccctgtcgctgcacgtaatggaccagacc
aagaaagacttcgaagccgagggcaagacctacaccgcgacaccgggcgagctcgtcgtc
gagaagatggtcaaacagcacagccgccccggccgcgccggtggtgcgggcttctacgag
taccccacagacaaagccgtgaagaagttcctgtggcccgaactcaaaggcttgttcgag
aaggccgatgcgaactggaacatcaccgatctgaaagaccgtttgctgtaccgccaggcc
gtggagaccgcacgctgcctgtccgagaacgtgttgaccagcgtgcacgacgccaacatc
ggctcgatcttcggcatcggcttccccgcctggaccggtggtgccatgcagttcatctac
ggcatcggtgtggacgcgttcgaagcgcgtgcggcagagctggccaaggcctacggcccg
ggctttgcgctgacagccgaggtcaaagcggctatccgcaaataccagccggtgtattaa
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