Rhodoferax saidenbachensis: RS694_16375
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Entry
RS694_16375 CDS
T04623
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rsb
Rhodoferax saidenbachensis
Pathway
rsb00300
Lysine biosynthesis
rsb00470
D-Amino acid metabolism
rsb01100
Metabolic pathways
rsb01110
Biosynthesis of secondary metabolites
rsb01120
Microbial metabolism in diverse environments
rsb01230
Biosynthesis of amino acids
Module
rsb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RS694_16375
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RS694_16375
Enzymes [BR:
rsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RS694_16375
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TRA-1_regulated
Motif
Other DBs
NCBI-ProteinID:
APW43953
UniProt:
A0A1P8KD39
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All DBs
Position
3426602..3427885
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AA seq
427 aa
AA seq
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MTLPSLPGHPHIHYQNGLLQVEDQNLDALATEYGTPLFVYSKASMLAALAAYQRGFAGRN
AQICYAMKANSSLAVLQVFARAGCGFDIVSGGELERVLAAGADVSKVIFSGVGKTRTEMQ
RALEAGIGCFNVESEAEIEVLNTVAVALNLRAPISIRVNPNVDPKTHPYISTGLKGNKFG
IAHERTLATYQRAAALPGLHVVGIDCHIGSQITLEAPYLDAMDRMLDLVESIEAAGIPIE
HIDFGGGLGINYAGDTPPAADALWAKLLAKLDARGFGQRKLMIEPGRSLVGNAGVCVTEV
LYMKPGEQKNFCIVDAAMNDLPRPAMYQAFHNIVPLNESQQAGSSADVFDVVGPVCESGD
WIGHDRALAVQAGDRLAVLSAGAYCMSMSSNYNSRPRAAEVLVDGPQAHLIRARDTLADQ
LRGEKLL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactctccccagcctgccgggccatccccatatccactaccagaacggtctgctccaa
gtggaagaccagaacctggatgctttggcaaccgaatacggcacaccgctgttcgtttac
tccaaagcctccatgctggcggccctggcggcctaccagcgtggctttgccgggcgcaac
gcgcagatttgttacgccatgaaggccaactcgtccctggccgtgctgcaggtctttgcc
cgcgcaggttgtggctttgacatcgtgtccggcggagagctggagcgggtgttggctgca
ggcgcggatgtttccaaagtcattttttccggcgtgggcaagacccgtaccgagatgcag
cgcgccctcgaagctggcattggctgcttcaacgtggagagcgaagcagaaattgaggtg
ctgaacaccgtggctgtggcgctgaacctgcgcgcgcccatcagcatccgcgtcaatccc
aatgtggaccccaagacccacccctacatctccaccgggctgaagggcaacaagttcggc
atcgcccacgaacgcacgctggccacctaccagcgcgctgccgccctgccgggcctgcat
gtagtcggtattgactgccatatcggctcacaaatcacgctggaagcgccctacctggat
gccatggaccgcatgctggacctggtcgaatccatcgaggctgcaggcatcccgattgag
cacatcgattttggtggcggcctgggcatcaactatgccggtgacaccccgcccgccgcg
gatgccctgtgggccaagctgctggccaagctggacgcgcgcggctttggccaacgcaag
ctgatgatcgagcccggccgctctctggtcggcaatgccggcgtctgtgtgaccgaggtg
ctctacatgaagcccggcgaacagaaaaacttctgcatcgtggacgcggccatgaacgat
ctgccccgcccggccatgtaccaggccttccacaacattgttccgctgaacgaaagccag
caggccggtagcagtgcagacgtctttgacgtggtgggcccggtctgtgaaagcggcgac
tggatcggccacgaccgtgcgctggccgtgcaggcgggcgaccgcctggcggtgctgtct
gcgggcgcctattgcatgagcatgtccagcaactacaactcgcgcccgcgtgcggccgaa
gtactggtcgatggcccccaggcccacctgatccgcgcccgggacacattggcagaccag
ctgcgtggcgagaaattgctataa
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