Rhodoferax saidenbachensis: RS694_16830
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Entry
RS694_16830 CDS
T04623
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsb
Rhodoferax saidenbachensis
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsb03400
]
RS694_16830
Enzymes [BR:
rsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RS694_16830
DNA repair and recombination proteins [BR:
rsb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RS694_16830
Prokaryotic type
RS694_16830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
TRPM_tetra
Motif
Other DBs
NCBI-ProteinID:
APW44034
UniProt:
A0A1P8KDF8
LinkDB
All DBs
Position
3517525..3519018
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AA seq
497 aa
AA seq
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MQQQFQTGLVWFRRDLRTHDNAALNTALQQCNQVHCVFIFDRAILDSLPRADRRVAFIHA
SLQELDASLRQLSGKPDGGLIVRYGFATEEIPALAAQLGAQAVYAARDYEPQARARDFQV
QTALLAQQARLITLKDHVIFEEREVLTQTGKPYGVFTPYMRAWLAKLGDVPPRAFDEVTP
HAPRLAERPPALSTPLPSLGDMGFEPGNLPDLRIPTGMSGAKKLLEDFWERMDQYEETRN
FPSVKGPSYLSVHLRFGTVSIRQLVGLALQRRLQGSEGASVWLSELVWRDFYFQVLANFP
HVAEHAFKPEYDQIAWESGEHAQQLFQAWCGGRTGYPLVDAAMAQLNQTGYMHNRLRMVA
GSFLVKHLGLDWRWGERYFAEQLNDFDLSANNGGWQWVSSSGCDAQPYFRIFNPINQSEK
FDAQGKFIKRYLPQLGALDAKSIHAPWLAKPLVLAAAGVTLGTNYPHPIVDHAEARARTL
QRYGVVRKTQDSTGVEQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacaatttcagaccgggctggtgtggttccggcgcgacctgcgtacacacgac
aacgccgccctgaacaccgccctgcagcaatgcaaccaggtgcattgtgttttcattttt
gaccgtgccattctggacagcttgccacgcgcagaccgccgggtggcctttatccacgca
tccctgcaggagctggacgccagcctgcgccaactgtccggcaaaccagacggtggcctg
atcgtgcgctacggttttgcgacagaagagattcccgctctggcggcgcaactgggcgca
caggcggtctatgcggcgcgggactatgagccgcaagcccgggcgcgtgatttccaagtg
caaacggctctgcttgcgcagcaggcccggttgatcaccctcaaagaccacgtgattttt
gaagagcgcgaggtgctcacacaaaccggcaagccttatggcgtttttactccttacatg
cgggcttggctggccaaactaggggatgtcccccccagggcttttgatgaagtcacgcca
catgcaccgcgcctcgcggagcgccccccggccctgtccacacccttgccttctctaggg
gacatgggtttcgagcccggtaacctgcctgatctgcgcattcccacgggaatgtcgggg
gcaaaaaaactgctggaggatttctgggagcgcatggaccagtacgaagagacgcgcaac
tttccttccgtcaaaggtcccagctacctgagcgtgcatttgcgctttggcaccgtatcc
atccgacagttggtcggcttggcattgcaacgacgactgcagggcagcgagggcgcttcc
gtttggctcagcgagctggtgtggcgcgatttctacttccaggtactcgcaaattttccg
cacgtggccgaacacgcgttcaagcccgaatacgaccagattgcatgggaatcaggcgag
cacgcacagcagctttttcaggcctggtgtggaggccgcaccggctacccgctggtggac
gccgccatggcccagctcaaccagaccggctacatgcacaaccgcctgcgcatggtggcg
ggcagttttctggtgaaacacctggggctggactggcgctggggcgagcgttattttgca
gagcaactcaacgactttgacctgtctgccaacaacggcgggtggcaatgggtcagctcc
agcggctgtgatgcacagccctacttccgcatcttcaaccccattaaccagagtgagaag
tttgatgcacaaggcaagttcatcaaacgttacctgccgcaactgggcgcactggatgcc
aaatccatccacgcgccctggctcgcaaagccactggttttggcggcggcaggcgttacc
ttaggaacgaactacccccaccccatcgtggaccatgccgaggcgcgggcacgcaccctg
cagcgttatggggtggtccgcaaaactcaagattcgaccggtgtagagcagtaa
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