Rhodoferax saidenbachensis: RS694_17300
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Entry
RS694_17300 CDS
T04623
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rsb
Rhodoferax saidenbachensis
Pathway
rsb00300
Lysine biosynthesis
rsb00470
D-Amino acid metabolism
rsb01100
Metabolic pathways
rsb01110
Biosynthesis of secondary metabolites
rsb01120
Microbial metabolism in diverse environments
rsb01230
Biosynthesis of amino acids
Module
rsb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RS694_17300
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RS694_17300
Enzymes [BR:
rsb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RS694_17300
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
APW44113
UniProt:
A0A1P8KDJ4
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All DBs
Position
complement(3625983..3626870)
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AA seq
295 aa
AA seq
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MRIPFTKMQGAGNDFVVLDETQGRLGLGAAHYRFLGDRHFGVGADQILTVRPAPSADVDF
EYVIHNADGNEVEQCGNGARCFARFVHDRGLTTKDTIRVQTMKGVIAPRLTADGRVTVDM
GPPRFVLEDIPFDGAGLAWQPMGSWGNWPLVLVDSAQVAPLLIATVSMGNPHAVTLVDNV
DTAPVVAQGPQVQASPRFPEGVNVGFMQVVNRSHIRLRVFERGVGETLACGTGACAAVVA
GIRLGLLDATVDVQTHGGVLTINWAGADAPVFMTGPATTVFQGEIELPDNLTDNP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattccattcaccaaaatgcagggggccggcaacgactttgttgtgctggacgaa
acccaaggccgcctgggcctgggcgctgcgcactaccgctttctgggcgaccgccacttt
ggggtgggcgcggaccagatactgaccgtgcggcccgcaccgtccgccgatgtggacttt
gaatacgtgatccacaacgccgatggcaacgaggtggagcagtgtggcaatggcgcgcgc
tgctttgcccgttttgtgcacgaccgcggcctgaccaccaaagacaccatccgcgtgcag
accatgaagggcgtgattgcgccccgcctcacggccgatggccgcgtgacggtcgacatg
gggccgccgcgttttgtgctggaagacattccgtttgatggcgccggtttggcctggcaa
cctatgggttcatggggaaattggcctctagtccttgtggatagtgcgcaagtagctccg
cttttgatagcaactgtgtccatgggtaacccgcatgcggtgaccctggtggacaacgtg
gacacggcgcctgtagttgcacagggcccgcaggtgcaggccagcccgcggtttcccgaa
ggcgtgaacgtgggcttcatgcaggtggtgaaccgcagccacatccgcctgcgggtgttt
gagcgcggcgtgggtgaaacgctggcctgcggcacgggtgcctgcgcggccgtggtggcc
ggtattcgcctggggctgctggatgccacggtggacgtgcaaacccacggcggtgtgctg
accattaactgggctggtgcggatgcaccggtcttcatgacggggccggccaccaccgtg
ttccagggtgaaattgaactacctgacaacttgacagacaacccatga
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