Rhodoferax saidenbachensis: RS694_18870
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Entry
RS694_18870 CDS
T04623
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsb
Rhodoferax saidenbachensis
Pathway
rsb00061
Fatty acid biosynthesis
rsb00071
Fatty acid degradation
rsb01100
Metabolic pathways
rsb01212
Fatty acid metabolism
rsb02024
Quorum sensing
rsb04146
Peroxisome
Module
rsb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RS694_18870
00071 Fatty acid degradation
RS694_18870
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RS694_18870
09145 Cellular community - prokaryotes
02024 Quorum sensing
RS694_18870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsb01004
]
RS694_18870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsb04147
]
RS694_18870
Enzymes [BR:
rsb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RS694_18870
Lipid biosynthesis proteins [BR:
rsb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RS694_18870
Exosome [BR:
rsb04147
]
Exosomal proteins
Exosomal proteins of breast milk
RS694_18870
Exosomal proteins of breast cancer cells
RS694_18870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1576
Motif
Other DBs
NCBI-ProteinID:
APW44379
UniProt:
A0A1P8KED8
LinkDB
All DBs
Position
complement(3973884..3975557)
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AA seq
557 aa
AA seq
DB search
MTDRIWLKSYPQGVPADINTTQYTSLVALMEESFKKYAGRTAYNFMGKEVSYAQTDSLSQ
AFAGYLQGLGLVKGDRVAIMMPNVPQYPVAVAGILRAGFVVVNVNPLYTPRELEHQLKDS
GAKAIVIIENFATTLEKCIAATPVKHVVLCAMGDQLGLLKGTLVNYVVRNVKKMVPAYNL
PGAVRFNAAVAKGTNAKFTKPDIKADDVAVLQYTGGTTGVSKGAVLLHRNVIANVLQSEA
WNDPVMKKVPANEQPTGVCALPLYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAVLKELS
KHTIHSFPAVNTLFNGLANHPDFNTVDWSHLKISVGGGTAVQSGVAKLWFDKTGCPICEG
YGLSETSPSASCNPVTSKEYTGTIGIPLPNTYLKLLDDDGNEVPVGQSGEIAIKGPQVMA
GYWQRPDETAKVMTPDGFFKSGDIGVVDERGFFKIVDRKKDMILVSGFNVFPTELEDVVA
QMPGIMECACVGVVDAKTGEAVKLVIVKKDADVTEADVRAYCKENLTGYKQPKVIEFRTE
LPKTPVGKILRRELRDK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccgcatttggctcaagagctacccgcaaggggtgcctgccgacatcaacacc
acccagtacacctcgctggtggccctgatggaggagagcttcaagaagtacgctggccgc
acagcctacaacttcatgggcaaggaagtgagctacgcccagaccgacagcctgagccag
gcgttcgcgggttatctgcagggcttgggactggtcaagggtgaccgtgtggcgatcatg
atgcccaacgtgccccagtaccccgtggcagtggccggcatcctgcgtgccggttttgtc
gtcgttaacgtcaatccgctttacaccccgcgtgaactggagcaccagctcaaggactcg
ggcgccaaagccatcgtcatcatcgaaaacttcgccacaacgctggaaaagtgcattgcc
gccactccggtcaagcatgtggtgttgtgcgccatgggcgaccagttgggcctgctcaag
ggcacgctggtcaactatgtcgtgcgcaacgtcaagaagatggtgcctgcctacaacttg
cccggtgccgtgcgctttaacgccgcagtggccaagggcacgaatgccaagttcaccaag
cccgacatcaaagccgatgacgtggctgtgctgcagtacaccggcggtaccaccggtgtc
tccaagggcgcagtgcttctgcaccgcaatgtgattgccaacgtgctgcagtccgaggcc
tggaatgacccggtcatgaagaaggtccccgccaacgagcagcccaccggcgtgtgcgct
ttgccgctgtaccacatcttcgcgtttacggtcggcatgatgctgtccatgcgcacgggt
ggcaagctgatcctgatccccaatccgcgtgacattcccgcggtgctcaaggaattgtcc
aaacacaccatccacagcttcccggccgtgaacacgctgttcaatggcctggcgaatcac
cccgatttcaacacggtggactggagccatctgaagatttccgtgggcggcggtacagcc
gtgcaaagcggtgtggccaagctgtggttcgacaagaccggttgcccgatctgcgaaggt
tatggcctgagcgagacctcgccgtccgccagttgcaaccccgtcacctccaaggaatac
accggcaccatcggtattcccttgccaaatacctacctgaagttgctggacgacgacggc
aatgaagtgccggtgggccagtccggcgaaatcgccatcaagggtccgcaggtaatggct
ggttattggcagcgtcccgatgaaaccgccaaggtcatgaccccagatggtttcttcaag
tcgggtgacattggcgtcgtcgatgagcgcggcttcttcaagattgtggaccgcaagaag
gacatgattttggtgagcggcttcaacgtgttccccaccgaactcgaagacgtggtcgca
cagatgcccggcatcatggagtgcgcgtgtgtaggtgtggtcgacgcgaaaaccggcgaa
gccgtcaagctggtcatcgtcaagaaagatgccgacgtgaccgaagccgacgtgcgtgcc
tactgcaaggaaaacctcacgggttacaaacagcccaaggtgattgagttccgtaccgag
ttgccaaagactccggtgggcaagattctgcgccgcgagttgcgtgacaaataa
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