Ralstonia solanacearum CFBP2957: RCFBP_10570
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Entry
RCFBP_10570 CDS
T01272
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase (UDG)
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCFBP_10570 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_10570 (ung)
Enzymes [BR:
rsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RCFBP_10570 (ung)
DNA repair and recombination proteins [BR:
rsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RCFBP_10570 (ung)
Prokaryotic type
RCFBP_10570 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CBJ41875
LinkDB
All DBs
Position
complement(587984..588784)
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AA seq
266 aa
AA seq
DB search
MTRRADPAQATLFDADAPAGAPTARGGFIPLADQFNALPADWKTLLEPCLARTDWPALCA
FVDGERAAGKPIFPTEVFHALHLTPVDGVRVVILGQDPYHGTGTVDGREVPQAHGLAFSV
PAGVRVPPSLRNIYKEIEAEYGHKLPAGSGNLEGWAQQGVLLLNTVLTVEQGQAASHARR
GWERITDCLLEHLARIGHPRAFMLWGSHAQAKRALLPEGHLVLEAPHPSPLSAHRGFLGC
GHFRAANDWLAAQGQPTIDWLKPQAG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccgcgccgacccggcccaggccacgctcttcgacgccgacgcacccgccggc
gcgccgacggccagggggggcttcatcccgctggccgatcagttcaatgcgctgcccgct
gactggaaaacgctgctcgaaccatgcctcgcgcgcaccgactggcccgcactgtgcgcc
ttcgttgacggcgaacgcgcggccggcaagccgatcttcccgaccgaggtcttccatgcc
ctgcacctgacgccggtcgacggcgtgcgcgtggtcatcctcggccaggacccgtaccac
ggcaccggcacggtcgacggccgcgaggtgccgcaggcgcacgggctggccttctcggtg
cccgccggcgtgcgcgtgccgccgagcctgcgcaacatctacaaggaaatcgaggcggaa
tacggccacaagctgcccgccggctcgggcaacctggaaggctgggcgcaacaaggcgtg
ctgctgctcaacacggtgctgaccgtcgaacagggccaggccgccagccacgccaggcgc
ggctgggaacgcatcaccgattgcctgctggagcacctggcgcgcatcggccacccgcgc
gcgttcatgctgtggggcagccacgcccaggccaagcgcgccttgctgccggagggccat
ctggtgctggaggcgccgcacccgtcgccgctgtcggcgcatcgcggctttctgggatgc
gggcatttcagggccgccaacgactggctggcggcgcaggggcagccgacgatcgattgg
ctgaagccacaggcgggctga
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