Ralstonia solanacearum CFBP2957: RCFBP_10939
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Entry
RCFBP_10939 CDS
T01272
Name
(GenBank) putative DNA helicase
Organism
rsc
Ralstonia solanacearum CFBP2957
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_11
AAA_12
DUF3320
AAA_19
AAA_30
SLFN-g3_helicase
Viral_helicase1
UvrD-helicase
AAA_22
AAA_16
Mg_chelatase
nSTAND3
DUF553
ResIII
Transglut_core
bpMoxR
AAA_25
Adeno_IVa2
DUF559
FtsK_SpoIIIE
DEAD
AAA_5
AAA_7
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
CBJ42240
LinkDB
All DBs
Position
complement(974275..980199)
Genome browser
AA seq
1974 aa
AA seq
DB search
MVQGQAGEAENLTTSEATLPSVQVIADLTIGYAAVQNNVPVIREILVTNDGKTTLTDVEL
TVKCVPAFAESARFRFEALAAGESRRLAPVDLRPDHQYFSRLDESERASIAASLSIQGNE
LATATHSIDVLAYDQWAGTRSLPELLAAFCMPNSRVVDKLIARASGLLRQTSVDLSMDGY
QSKNREKVWKQVSAIYSTVVAEDIQYSNPPASFGNDGQKIRTPERILDSKLATCLDLAML
FASCLEQAGLHPVVLFKEGHAWVGVWLIETDFPTALVDDVQAIRKRVKSGEFMVFETTGV
AGGQKPSLRWACSRGEEHLNDEEQFAYAVDIRRAREVQIRPLPSRSSHLDEATAPIAKGD
VPVIEDVPQLPPLDPVVVPLRDDVMPDTPEGRLAKWKSKLLDLTLRNKLLNFKPSKTTLR
VICPDPGALEDRLAEGSEFRVRALPKMMTGADGRDANVYAGRNGTSALDDLAADALSRNE
IVTDVSEDALEGKLLEVFRAASTGMEEGGANTLFLAFGMLQWQESKDAESSHLAPILLIP
VTLSRQSVRSGFRLVRHDDDALVNPTLLQKLLQDFSLKLPSFDTLPTDDRGIDVNRILQS
FRLHVGELKGWEVKEQVHLGIFSFTKYLMWKDLQDRQKQLQESSVVAHLINNPGKAFADS
ATGFEPNTLDEKFRPQDLFTPLLSDSSQLRAVCVAAEGKNLLIEGPPGTGKSQTISNLVA
HLLATGKTVLFVSEKMAALEVVHRRLSSLGLGPFCLELHSSKAKKADVLKQLGIALDAAG
ARTVKDWERESERLLALRTDLNGVANALHRIHSNDLTIYDAIGTTLQYAEMRPGPMPWAD
ADVHDRAQLETLRETCRQMGALAGQLAGLQNHPLAVIRKTEWMPSWQQEFLDAVSMLEAQ
INKLDEATSSLLNLLGLPKIAFSLNQLGKFDALADVLSAAPTVPVDVARSAHDESVRSRL
VSLRQHGLARNQAWEPLSKFYVEDVATLNASELKLQWAAATNTWWPKSWLAQRAVTGRLR
LYRQDQRRPQGTDVPAVIAALTTVNVEDKAIESMSSDASQLLHETFAASKTDWNVVESAE
RWATSFADAVSAIAGSDIELAQTLRVKLQPFVSDNRGMLKAGTPLGTSLLSYRDCYREAI
AQLRRVVEFGNCHADLGLEPTASGVIPRLLGLLQGWHSASRQLQPWCLWRKSRANAISSG
LQGIVDALEAGEVPLSSVATFFEYSYQSWWLRKAIDREPVLCNFASAEHDRKIAEFKEAD
ERFQKLTQQYIAAKLAGQIPASVGVVPGADSELGRLRRELQKQRKHMPIRQLVQNLPSLM
TRLKPCLLMSPLSVAQYLDASHAQFDVVIFDEASQIPVWDAVGAIARGKQLVCVGDPKQL
PPTSFFSRADDSEEGPDGDDIQDLESILDECLSIGLPELRLNWHYRSKHEGLITFSNVTY
YDNELVTFPSPVTDDQSVRFERVQGVYDRGGSRTNRAEADAIVKAIEQHYLDPTKRDLTL
GVVTFNQAQQSLIERMLDERRRASQPLDQAIAQARQEGLFIKNLENVQGDERDIIFFSIT
YGPDASGKVSLNFGPLNLEGGHRRLNVAVSRARVGVVIFSTLLPEQIDLSRVRAAGVRDL
KNYLEFAIRGPRALVEQSLPTGREPDSPFERQVIVALREKGWTVHPQVGVSGYRIDIGVV
DPRAPGRYLLGVECDGRTYHSGATARDRDRLRQHVLEGLGWQLHRIWSTDWWLNPDEPMR
KLQYRLEELVATEPTESEPVVVPMEEVEPADAPVLYARAESESGSADSLTSIPAYELTSL
SANNPDRFYEGSLMPLLASQLLKVVETEGPVSQATAFKRVTRSWGLSRVGSRIEAHLNAL
VPSHVTRTTDNGTVFYWPEHANPNTWDGIRVPGSDPDTRRSIDEICLEELGNAAVYVLQQ
QGGTSQDGLVKAVCRLLGVARTTTEAGARISRALTHGRVQAVVAVADGSVHLRK
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagggacaggcaggtgaagcggagaatttgacgacttccgaagcgacgctaccg
agcgttcaagttattgcggacctcacaatagggtacgcagcagttcagaacaacgtccct
gtcattcgcgaaatcctggtgaccaatgatgggaagacaacgctcacggacgtcgagcta
accgtcaaatgtgttcccgcctttgcggagagtgcccgctttcgtttcgaggcactggct
gccggcgagagccgccgcctggcgcccgtcgacctgcgcccagaccatcagtatttcagc
cgcctcgatgagtccgaacgcgcaagcattgctgcttcattgagcattcaaggcaacgag
cttgcgacggcgacacacagcattgatgtgctcgcctacgaccagtgggctggtacgcgg
tccttacctgagctattggccgcgttctgcatgccgaactcgagggtcgtggacaagctc
attgctcgggcatctggattgttgcgccagacgtctgtcgacctgtcgatggacggctac
caatccaagaatcgtgaaaaagtctggaagcaggtgtcggcaatctacagcaccgtagtt
gccgaggacattcaatactcgaatccgccggcttcattcgggaacgacggtcagaaaatc
cgaacccccgagcgcatcctcgacagcaagctagcgacctgtctcgaccttgcaatgctg
tttgcgtcttgcctggagcaagccggcctgcatcctgttgtgctgttcaaagagggccat
gcctgggtgggcgtttggttgatagaaaccgatttccccactgcactggtggatgacgtt
caggcgattcgtaagcgcgtgaagtcgggggaattcatggtcttcgagaccaccggcgtg
gcgggcggccagaagccgtcactgcgctgggcctgctctcgtggtgaggagcatctgaac
gacgaggagcaattcgcgtatgcagtggatattcgacgcgcacgcgaagtccaaattcgc
ccgctgccctcccgctcgtcgcacctcgacgaagctaccgccccgattgccaaaggcgat
gttcctgtcattgaggatgtccctcagttgccgccattggacccggttgtggtgccgctg
cgtgacgacgtcatgcctgacacacccgaaggacgcctggcgaaatggaaaagcaagctg
ctcgacctgacgctgcgcaacaagcttctgaacttcaaaccgtctaaaaccaccttgcgc
gtcatctgcccggacccgggtgcgctagaagaccggcttgcggaggggagcgagtttcgt
gttcgcgcgctgccaaaaatgatgactggggcggatggtcgggatgccaacgtgtatgcc
ggccgcaacggcacctctgccctcgatgacctggcagccgacgctctcagccggaacgaa
atcgtcactgacgtcagcgaagacgccttggaaggcaagcttctcgaggtattccgggcc
gccagcacagggatggaggaaggtggcgccaatacgctgtttctcgcattcggaatgttg
caatggcaggagagcaaggatgccgaatcgagccaccttgccccgattctgctcatcccg
gtcacgctgtcccgtcagtccgtcaggagtggttttcggctggttcgtcacgacgacgat
gccctcgtgaatccgacgctgctccagaagttactgcaggacttcagccttaaattgccg
tcgtttgacaccctaccgaccgatgaccggggtatcgatgtcaatcgcatactgcaaagc
ttccggctgcatgtgggtgaactgaagggatgggaggtcaaggagcaagtccatctgggc
attttctcgttcacgaagtacctgatgtggaaggacctccaggaccgccagaaacaactc
caggaaagcagcgttgttgcccatctgattaacaaccccggcaaggcattcgcggacagc
gcgacggggttcgagcccaataccctggatgagaaattccggccgcaagacttgttcacg
ccgcttctatcggactcttcgcagttgcgcgcggtttgcgtagccgccgagggcaagaat
ctgcttatcgaaggtccgcctggaacgggcaagagccagactatctcgaacctggttgcc
catctgctggcgacggggaagaccgtcctgtttgtctccgaaaagatggctgcgctcgag
gtggtgcaccgccggctcagcagcttggggctcggcccgttctgcttggaactgcactct
tccaaggcgaagaaggcggacgtcctgaagcagcttggtatcgcgctcgacgccgcaggc
gcacgcacggtaaaggattgggagcgagagtccgaacggctgctcgcgctgcgcaccgac
ctgaatggcgtggcgaatgccctgcaccgcatccattcgaatgacctgacgatttacgac
gccatcgggaccaccctgcagtatgcagaaatgcggccgggcccaatgccgtgggcagac
gcggacgtacacgaccgggctcagcttgagacattgcgggaaacctgccgccagatgggg
gcgttggccggacaactggctggtttgcagaatcacccgctggccgtaatccgtaaaacc
gaatggatgccgagctggcaacaagagttccttgacgcggtctcgatgcttgaggctcaa
atcaacaagctggatgaggctacatcgagcctgctgaatctactgggcctgcccaagatt
gccttctccttgaaccaactgggtaagttcgacgcgctggccgacgtgctttctgctgcg
ccaaccgttcccgttgatgttgcccggtcagcgcatgacgagtccgttcgaagcaggctt
gtcagcttgcgccagcacggtcttgcgcgtaatcaagcatgggagccacttagcaagttc
tacgtggaggatgtcgccacactaaatgcctctgagctgaaactgcagtgggcagcggcg
accaatacctggtggccgaagagctggctcgcccagcgggcagtcactgggcgattgcgc
ctgtatcgtcaggaccaacggcgtccgcaaggcaccgatgttccggcagtcatcgcggca
ttgaccactgtcaacgtcgaggacaaggccattgagtccatgtcttcggatgcatcgcaa
ctgctgcatgaaacctttgcggcatccaagacggattggaatgttgtcgagagtgcggaa
cggtgggcgacgtcgtttgctgatgcggtgagtgccatcgcaggcagtgacatagaactc
gcccaaacgctgcgtgtaaagctccagccattcgtctcggacaatagaggcatgctgaag
gcgggcacgcctcttgggacgagtttgctgtcgtaccgcgattgctatcgagaagccata
gctcaactgcgccgtgtagttgagttcgggaactgccacgcagaccttgggcttgagcca
accgcgtctggcgtgattcctcgacttctgggtctacttcagggatggcattcagcgtcg
cgccaactgcagccgtggtgtttgtggcggaaatcccgagctaacgcaatcagtagcgga
ttgcagggaattgtcgatgcgcttgaggcaggtgaagtgccactgtccagcgtagcgacg
ttcttcgaatacagctatcagagctggtggctgcggaaggcgattgaccgggagcccgtc
ctctgcaatttcgcgagcgccgagcatgaccgaaaaattgccgagttcaaggaagccgat
gagcgtttccagaaactgacccagcaatatatcgcggcaaagctggcaggccagattcca
gccagtgtcggcgtagtccctggggcagactctgaattggggaggctacggcgtgaactg
cagaagcagcgcaaacacatgccgattcggcaactggtgcagaacctgccaagcctgatg
acccggctcaagccatgtctgctgatgtccccactgtcagtcgcgcaatacctggatgct
tctcatgcccagttcgacgtggttattttcgatgaggcatcacagattccagtttgggat
gcggttggcgcaatcgcccgcggcaagcaactcgtttgtgtcggagacccaaagcagctg
ccgcctaccagcttcttcagccgggcggacgattccgaagaagggccggatggcgatgat
attcaagacctcgagagcattctcgacgagtgtctgagcatcgggctaccagagcttcgg
ctgaactggcactaccgaagcaagcatgaggggttgattacatttagcaacgtcacctac
tacgacaacgagctggtgacatttccgtcgccggtcacagatgaccagagcgtgcgcttc
gagcgcgttcaaggcgtctatgaccgtggcggttccagaaccaaccgggccgaggcggat
gctatcgtcaaagcgattgagcaacactatctcgacccaacgaagcgcgacttaacgttg
ggcgtggtgactttcaaccaagctcagcaaagcctgattgagcgcatgcttgacgagcgc
cgccgggcctctcagccgctggaccaggctattgcgcaagcgcggcaagaagggctgttc
atcaaaaacctggagaacgtccagggcgatgagcgcgacatcatcttcttctcgattacc
tacgggcctgatgcatccggaaaggtcagcctcaatttcgggcctctgaatctcgaaggg
gggcatcggcgccttaacgttgcggtgtctcgtgctcgagtgggcgttgtcattttcagc
acgctgcttcctgagcaaatcgacctgtctcgtgttcgggccgctggcgtacgcgatttg
aagaactatcttgagttcgctattcgggggccacgtgccctggttgagcagagcctgccg
acgggccgagagcctgacagtccgttcgagcgccaggtgattgtggcccttcgtgagaag
ggctggactgttcacccgcaggtaggagtttctggataccggattgacattggcgtagtt
gaccctcgtgcgccggggcgctacttgctaggggtcgaatgtgatggtcgtacttatcac
tccggtgccaccgcgcgcgaccgtgaccgactccgtcagcatgttcttgaaggactaggg
tggcagttgcatcgaatctggtccactgattggtggttgaacccagacgagccgatgcgg
aagctgcagtatcgactggaagagttggttgcgaccgagccgaccgagagcgagccggtc
gttgtgccgatggaggaggtagaacccgccgacgcacctgtcttgtatgccagagccgaa
tctgaatcagggtcggcagattctctaacgtcgatacctgcgtatgaattgaccagtttg
agcgcaaacaaccccgaccgcttctatgagggaagtttgatgccgctccttgccagccag
ttgctcaaggtagtcgagacggaagggcctgtgtcgcaagcgaccgcattcaagcgcgtg
acgcgctcctgggggctatcacgggttggcagccgtattgaggcacatctgaacgctctt
gtaccgagtcacgtgacccgcacaacggacaacggtacggtcttctactggccagagcat
gccaatccgaatacctgggacggcatccgcgtgcccggaagcgacccggacacgcgtcgc
agtatcgacgagatttgtcttgaagaacttggcaatgctgcggtgtacgtcctgcagcag
caaggcggcacatcgcaagatggattagtgaaggcagtttgcagactgctgggggtagct
agaacaacgacagaggccggggcgcgaatttccagggctctgactcacggacgagttcag
gcggtagtggcagtagctgatggttcagtccacctgcggaaatga
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