Ralstonia solanacearum CFBP2957: RCFBP_11157
Help
Entry
RCFBP_11157 CDS
T01272
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03420
Nucleotide excision repair
rsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCFBP_11157 (uvrD)
03430 Mismatch repair
RCFBP_11157 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_11157 (uvrD)
Enzymes [BR:
rsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCFBP_11157 (uvrD)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCFBP_11157 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RCFBP_11157 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CBJ42456
LinkDB
All DBs
Position
1195716..1198091
Genome browser
AA seq
791 aa
AA seq
DB search
MSDLLAHLNPEQRAAVTLPDESALILAGAGSGKTRVLTTRIAWLIQSSRVSPSGVLAVTF
TNKAAKEMTARLSAMLPINTRAMWIGTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSA
VKRLLKSLNIDDEKFPPKNVQYFINGAKEQGLRAGDLEIANEFDRRMADLYAAYDAQCQR
EGVVDFAELLLRCYELLRYNDAIRAHYQRRFKHILVDEFQDTNRLQYAWLKILAGLGEPG
VAPNAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVEHRIKLEQNYRSHGNILDTANHLI
AHNTRRLGKNLRTDAGLGEPVRVYQSATDGQEAGWIVDEIRERIASGTARSEIAILYRSN
AQSRVIEHSLFSVGIPYKVYGGLRFFERAEIKHALAYLQLLENVDNDAAFGRVVNFPARG
VGARSLELLQDAARLYGASLAASVPYLTGAAGTKLAAFVRLIEQMRADTRQMTLPEIVQH
VIHASGLITHYQGEKEGLDRIENLQELVTAAQAFVAEEGYGADAIATALPVRHDAMLRIE
GGETDGDVVAELVAGEAPMEMTPLVAFLTHASLEAGDNQAQAGQDAVQLMTVHAAKGLEF
HVVFITGLEEGLFPHENSLQDTDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQIRYH
IRSRFFDELPEATLKWLTPQHAGYSPTRRAQGAQGDNAWGRDWFKRPERGDDEAYTGRPT
GGMDTGKNYADAKRAAETGFRVGQSVFHSKFGEGVITTLEGEGTDARAHIKFNRHGVKVL
ALGIAKLDPIN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctcgctcatctgaaccccgaacaacgcgccgctgtcacgcttcctgac
gaatcggcgctgatcctggccggggcgggcagcggcaagacgcgtgtgctgaccacccgc
atcgcctggctgatccagagcagccgggtgtcgccgtcgggtgtgctggccgtcaccttc
accaacaaggcggccaaggagatgaccgcgcggctgtccgccatgctgccgatcaacaca
cgcgccatgtggatcggtaccttccacggcctgtgcaaccggctgctgcgcgcacactac
cgcgacgccgggctgccgcagaccttccagatcctcgatacgcaggatcagctctcggcg
gtcaagcgtctgctcaagtcgctgaacatcgacgacgagaagttcccgcccaagaacgtc
cagtacttcatcaacggggccaaggagcagggcctgcgcgcgggcgacctggaaatcgcc
aatgaattcgaccgccgcatggccgacctgtatgcggcctacgatgcgcagtgccagcgc
gagggcgtggtcgacttcgccgagctgctgctgcgctgctatgagctgctgcgctacaac
gatgcgatccgcgcgcattatcagcggcgtttcaagcacatcctggtcgacgagttccag
gacaccaaccgcctgcaatacgcctggctgaagatcctggccggcctgggcgagccgggc
gtcgcgcccaacgccatcttcgccgtgggtgacgacgaccagagcatctacgccttccgc
ggcgccaatgtcggcaacatggtggacttcgagcgcgaattccgcgtcgaacaccgcatc
aagctggagcagaactaccgttcgcacggcaacatcctggatacggccaaccacctgatc
gcccacaacacccgccgcctgggcaagaacctgcgcaccgacgccggcctgggcgagccg
gtgcgcgtctaccagtccgccaccgacggccaggaggccggctggatcgtggacgagatc
cgcgagcgcatcgccagcggtacggctcgctccgaaatcgccatcctgtaccgcagcaac
gcgcagtcgcgggtgatcgagcattcgctgttctcggtgggcatcccttacaaggtgtac
ggcgggctgcgcttcttcgagcgcgccgaaatcaagcacgcgctggcctacctgcagttg
ctggagaacgtggacaacgatgccgccttcggccgcgtggtcaacttcccggcacgcggc
gtcggcgcgcggtcgctggagctgctgcaggatgcggccaggctgtacggcgcatcgctg
gcggcatcggtgccctacctgaccggcgcggcggggaccaagctcgcggcgttcgtgcgg
ctgatcgaacagatgcgcgccgacacgcgccagatgacgctgcccgagatcgtccagcac
gtgatccacgccagcggcctcatcacgcattaccagggcgagaaggaaggcctcgaccgc
atcgagaacttgcaggaactggtgactgccgcgcaggccttcgtggccgaggaaggctat
ggcgccgatgccatcgccaccgcgctgccggtgcgccacgatgcgatgctgcgcatcgag
ggcggcgagacggacggcgatgtcgttgccgagctggtcgccggtgaggcgccgatggag
atgacgccgctggttgccttcctgacgcatgcctcgctggaggccggcgacaaccaggct
caggccggccaggacgcggtgcaactgatgaccgtgcacgcggccaaggggctggagttc
cacgtcgtcttcatcaccggactggaggaaggcctgttcccgcacgagaacagcctgcag
gacaccgacggcctggaagaagagcgtcgcctgatgtacgtggcgattacccgggcgcgc
gagcgtctgtatctgtcatttgcacagagtcgcgtgctgcatgggcagatccgctaccac
atccgctcgcgcttcttcgacgagctgccggaagcgaccctgaagtggctgacgccgcag
cacgccggctacagccccacgcgccgcgcgcagggcgcgcaaggcgacaacgcctggggc
cgcgactggttcaagcgccccgagcgcggcgacgacgaagcttataccggccgcccgacc
ggcggcatggacaccggcaagaactacgccgatgccaagcgcgcggccgagaccggcttc
cgcgtcgggcagtcggtgttccacagcaagttcggggaaggcgtcatcacgacgctggaa
ggcgagggcaccgatgcgcgcgcccacatcaagttcaaccgccacggcgtgaaggtgctg
gcgctgggcatcgccaagctggacccgatcaactga
DBGET
integrated database retrieval system
