Ralstonia solanacearum CFBP2957: RCFBP_11183
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Entry
RCFBP_11183 CDS
T01272
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase, deaD-box family
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RCFBP_11183 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsc03019
]
RCFBP_11183 (rhlE)
Enzymes [BR:
rsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RCFBP_11183 (rhlE)
Messenger RNA biogenesis [BR:
rsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RCFBP_11183 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CBJ42480
LinkDB
All DBs
Position
1226429..1227916
Genome browser
AA seq
495 aa
AA seq
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MNTETTSTAPSSDSVTFDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQ
TGTGKTAGFSLPIIQNLLPEANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTAL
RSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDM
GFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVI
YTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKT
QIERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAG
ASGDALSLFAPGDERLLADIEKLIKRNLPREALVDFDPTGEQARERDRRERDERRNRTEI
RRSRERDERNGARVLDHTVVRPPFRPSEDPFFSRPYESNVPAETAESAKPAQAAGHPRSA
KRPIAALLGGVPRKR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgagacaacgtctacagcaccgtccagcgattcggtgacgttcgacactttc
ggcctgcacccggatatcctgcgggccctgaccgagagcggttatacccggcccacaccg
atccaggccgctgcgattcccgtggtggtcggcggccgcgacgtgatgggcgcggcgcag
accggcaccggcaagaccgccggcttctcgctgccgatcatccagaacctgctgccggaa
gccaacaccagcgcctcgccggcgcgccacccggtgcgggcgctgatcctcacgcccacg
cgcgagctggccgaccaggtctacgacaacgtcgccaagtacgcgaagtacacggcgctg
cgcagcgcggtcgtgttcggcggtgtcgacatgaacccgcagaccgagcagttgcgccgc
ggcgtggagatcctcgttgccacgccgggccgcctgctcgatcacgtgcagcaacgcagc
gtgaacctgtcgcaggtgcgcatgctggtgctggacgaagccgaccgcatgctcgacatg
ggcttcctgcccgacctgcagcgcatcatcaacctgctgccggcgcatcgccagacgctg
ctgttctcggccacgttctcgccggagatcaagaagctggcggcgagctacctgcgccat
ccgcagaccatcgaagtggcgcgtagcaacgccaccgccgacaacgtccgccaggtcatc
tacaccgtgcccgatggccacaagcaggccgccctggtgcacctgctgcgccagcgcgcc
gagcagggcctgccgagccagtgcatcgtgttctccaacagcaagatcggctgttcgcga
ctggcccgggcgctggagcgcgagaagatcaacgccaatgccatccacggcgacaagacc
cagatcgaacgcatgcagacgctcgaggcgttcaagcagggtacggtcgacgtgctggtc
gccaccgacgtggcggcgcgcggcctcgacatctcgcagatgccctgcgtgatcaacttc
gacctgccgttcaacgcggaggactacgtccaccgtatcggccgcaccggccgtgccggc
gcctcgggcgatgcgctgtcgctgttcgctccgggcgacgagcggctgctggccgacatc
gagaagctgatcaagcgcaacctgccgcgcgaggcgcttgtcgatttcgatccgaccggc
gaacaggctcgcgagcgcgatcgccgcgagcgcgacgagcgccgcaaccgcaccgagatc
cgtcggtcccgcgagcgcgatgagcgcaacggtgcccgggtgctcgaccacacggtggtg
cgcccgccattccggccgtccgaagatccgttcttctcgcgtccgtacgagtcgaacgtg
cccgccgagacggcggaaagcgccaagccggcgcaggccgccggccacccgcgcagcgcc
aagcgtccgatcgcagccctgctgggcggcgtgccgcgcaagcgctga
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