Ralstonia solanacearum CFBP2957: RCFBP_11600
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Entry
RCFBP_11600 CDS
T01272
Symbol
xthA
Name
(GenBank) EXODEOXYRIBONUCLEASE III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCFBP_11600 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_11600 (xthA)
Enzymes [BR:
rsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RCFBP_11600 (xthA)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RCFBP_11600 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CBJ42891
LinkDB
All DBs
Position
complement(1644597..1645406)
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AA seq
269 aa
AA seq
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MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL
FTGQKTYNGVAILARKAAMPEGRDVVKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN
GQALDSDKMVYKMRWLAALQDWLKAEMVAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV
SPEERAAFRALESAGLVDAFRMFDQADKLFSWWDYRLFAFRRNAGLRIDHILLSPELAQR
CESCHIDRVPRGWEQPSDHTPVVAALRNA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgcaacttggaacgtcaactccctcaaagtccgcctgccgcacgtcctgcaa
tggctggccgagcgcgaagccgacgccacgcccatcgacctgctctgcctgcaggaactg
aagctgcccgatgaccgctatccgctggccgagctcgatgccgccggctacgcctcactg
ttcaccggccagaagacctacaacggcgtggccatcctcgcgcgcaaggccgccatgccc
gagggccgcgacgtggtcaagaacatcccgggctttgccgacgagcagcagcgcatcgtg
gccgccacgtacgatgtggccggcggtccggtgcgggtgatctccgcctacttccccaac
ggccaggcgctcgactccgacaagatggtctacaagatgcgctggctggccgcgctgcag
gactggctgaaggccgagatggtcgcccatccgcgcctgatgctgctgggcgatttcaac
atcgcccccgacgaccgcgacgtgcacgatccgaagaagtgggaaggcatgaatctcgtc
tcgcccgaggagcgcgccgcgttccgtgcgctggaaagcgccgggctggtcgatgccttc
cgcatgttcgaccaggcggacaagctgttctcgtggtgggactaccggctgttcgcgttc
aggcgcaatgccggactgcgcatcgaccacatcctgctgtcgcccgaactcgcccagcgc
tgcgagtcgtgccacatcgaccgcgtgccgcgcggctgggaacagccgtctgaccacacg
ccagtggtcgccgccctgcgcaacgcctga
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