Ralstonia solanacearum CFBP2957: RCFBP_11689
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Entry
RCFBP_11689 CDS
T01272
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta, transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsc03032
]
RCFBP_11689 (hupB)
03036 Chromosome and associated proteins [BR:
rsc03036
]
RCFBP_11689 (hupB)
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_11689 (hupB)
DNA replication proteins [BR:
rsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RCFBP_11689 (hupB)
Chromosome and associated proteins [BR:
rsc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RCFBP_11689 (hupB)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RCFBP_11689 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF4236
HU-CCDC81_euk_1
Nup214_FG
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CBJ42978
LinkDB
All DBs
Position
complement(1749560..1749832)
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AA seq
90 aa
AA seq
DB search
MNKAVLIAHIADQAGLKKTDANRALDAVLDGIRSTLADGGTVSLTGFGSFSVGARPARIG
RNPRTGEEVEIAASHVVKFKAGSDLKAAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagttctgatcgcacacatcgcggaccaagccggcctcaagaaaacggac
gccaaccgcgccttggatgccgtgctcgatggcatcaggtccacgctggccgatggcggc
accgtctcgctgaccggattcggcagcttcagtgtgggcgcacgcccggcgcgcatcggc
cgcaacccgaggactggtgaggaggtggagatcgccgcctcgcatgtcgtgaaattcaag
gccggcagcgacctcaaggcggctgtcaactga
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