Ralstonia solanacearum CFBP2957: RCFBP_20244
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Entry
RCFBP_20244 CDS
T01272
Name
(GenBank) putative helicase, C_term RecB family exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_20244
Enzymes [BR:
rsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCFBP_20244
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RCFBP_20244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CBJ43436
LinkDB
All DBs
Position
complement(2222777..2225668)
Genome browser
AA seq
963 aa
AA seq
DB search
MQTLAFAPGPAFLSHAADAAWRFFDAHAAQAPGTGVVVVPTAAQIPGVRGALHASAQAGG
VPRLLPRILTLGHWLLDLPPEPGLPAARSPLSRLLAVQQALKTQAWLREALGAQDDAALW
GVAQVLVTVSDELSQRWLTLDAADSETDGRHDALEAALSAALERTYAQLSERFLGTESRI
VLTFWRLLSGASDPIPVRLRAMRRLIDALRGPLVWMSPTDPEGADFDFLMRAAGRVPVLR
IGYDWQAREPAPEAAAPATHAAFRNLLLHAWSECGTAAQLAPEASAEAERPPPALRIAGA
ARFEDEAAFAAHTLVDWLNAGRRSLALVAQDRIVARRVRALLARVNVPVRDETGWKLSTT
RAAAALMRWLDVVQGDGDTAALLDLLKSPFCLREADAPSSVAPDWVAELERRVRRRNVSG
GWGRLRRLVAQRDTDAEGADASDATDAGPLAGRLAERLGLLADEAALWRRAGHATLEAWV
TLLAGTLDRLRMRAGLQSDDAGRQLLDWLDRLRVSVHGGADAGARFSLQEWRALLSMLLE
SAVFSEPAPPADRRVVILPLNGARMRRFDGVVVVGCDDAQLPSAQPEWLFFSNDVRRELG
LPDRAQRFAQQARDLAEVLLNQPEVVLTWQRHGGRGEPNRLSGWLERLQRRLAVAGMRID
APVVLPALQTASRPTDMPAPAAPALVPATLSAAAYNSLRRCPYQFFVGRMLRLGELGEVS
DELEKRDVGELLHAILHRFHRQLLDTPMADPADRLALLQSLTDERFGSLLAEDGHALRFY
RRWQNVMPSYLAWQAAREAQGWRFEAGEVDADTSIALPGGQALRLRGRIDRIDTHPEHGV
AVLDYKTQSPIALARKAKTPFEDCQLPFYGLLDARATVGGWVSLDGEARGDKRETGLPDF
TEVLDWLTEQMGKDMTALAAGAPLPAFGDESACRYCAERGLCRKGYWTAGAPREPQPETE
GQP
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgcttgctttcgcgcccggcccagcattcctgtcgcacgccgccgatgccgcg
tggcgcttcttcgacgcccatgccgcgcaggccccaggcaccggggtggtcgtggtgccg
accgccgcgcagattcccggcgtgcgtggcgccctgcatgccagtgcacaggcgggcggc
gtgccgcgcctgctgccgcgcatcttgacgctggggcactggttgctcgatctgccgccg
gagccgggcttgcccgccgcgcgcagcccgctgtcgcgcctgctggcagtgcagcaggcg
ctgaagacgcaggcatggctgcgcgaggcgctgggcgcccaggacgatgcggccttatgg
ggcgtggcgcaggtgctggtgacggtctcggacgagctgtcgcaacgctggctcacgctc
gatgccgccgacagcgagaccgacgggcggcacgacgcgctggaggcggcactgtccgcc
gcgctcgagcgcacctacgcgcaattgtccgagcgctttctcgggaccgagtcgcgcatc
gtgctgacattctggcggctgctgtcgggcgcatccgatccgattccggtgcggttgcgc
gccatgcggcgcctgatcgacgcactgcgcggtccgctggtctggatgagtccgaccgat
cccgaaggggccgatttcgatttcctgatgcgcgcggccggtcgcgtgccggtgctgcgc
atcggctacgactggcaggcgcgcgagccggccccggaggcggccgcgcctgcgacgcac
gccgcgttccgcaacctgctgctgcacgcctggtccgaatgcggcacggccgcccaactg
gcaccggaggcctctgccgaagcggagcggccaccgcccgcgctgcgcatcgccggcgcg
gcccgctttgaggacgaggctgcctttgctgcccacacgctggtcgactggctcaacgcc
ggtcgccgctcgctggcgctggtggcgcaggaccgcatcgtcgcgcgccgggtgcgcgcg
ctgctggcccgcgtgaacgtgccggtgcgggacgagaccggctggaagctgtccaccacc
cgcgctgccgccgcgctgatgcgctggctcgatgtggtgcagggcgatggcgatacggcc
gcgctgctcgatctgctcaagagcccgttctgcctgcgcgaggccgatgcgccgtcgtcg
gtcgcgccggactgggtggctgagctggagcgccgcgtgcgccggcgcaacgtgtcgggc
gggtgggggcgcttgcgccgcctggtcgcgcagcgggacacggatgccgagggcgcggat
gcatccgatgctaccgatgccgggccgttggccggccgcctggccgagcgccttggcctg
ctcgccgacgaagccgcactgtggcgccgcgccggccatgccacgctggaagcgtgggtc
acgctgttggccggcaccctggaccgcctgcgcatgcgcgcgggtctgcagagcgacgat
gctggccgccagttgctcgattggctcgaccgcctgcgcgtctcggtgcacggcggtgcc
gatgccggcgcgcgcttctcgctgcaggagtggcgcgcgctgctgtcgatgctgctggaa
tcggctgtcttcagcgagcccgcgccgccggccgatcgccgggtcgtgatcctgccgctc
aacggcgcgcgcatgcgccgtttcgacggcgtggtggtggtcggctgcgacgatgcgcaa
ctgccgtccgcgcagcccgaatggctgttcttctccaacgatgtccgccgcgagctgggc
ctgcccgatcgcgcccagcgctttgcccagcaggcccgcgacctcgccgaggtgctgctg
aaccagcccgaggtcgtgctgacctggcagcgccacggcggccgcggcgagcccaaccgc
ctgtcgggatggctcgagcgtctgcagcgccgcctggccgtggccggcatgcgcatcgat
gcaccggtcgtgctgcccgcactgcagacggccagccggccgaccgatatgcccgcaccg
gccgcgcccgcgctggtgcccgccacgctgagcgcggccgcctacaacagcctgcgccgc
tgtccctaccagttcttcgtcgggcgcatgctgcggctgggcgaactgggggaggtgtcc
gacgaactggagaagcgcgacgtcggcgaactgctgcacgcgatcctgcatcgcttccat
cgccaattgctcgacacaccgatggccgatccggccgaccgcctcgcgctgctgcagtcg
ctcaccgacgagcgcttcggctcgctgctggccgaggacgggcatgcgctgcgcttctat
cgccgctggcagaacgtgatgccgtcctacctggcctggcaggcggcgcgcgaggcgcag
ggctggcgcttcgaggccggtgaggtcgatgccgatacgtcgatcgcactgcccggtggt
caggcattgcgcctgcgcggacgcatcgaccgcatcgacacgcatcccgaacacggcgtg
gcggtgctggactacaagacgcaatcgccgatcgccctggcacgcaaggcgaagacgccg
ttcgaggattgccagctcccgttctacggcctgctcgatgcgcgcgcgacggtgggcggc
tgggtctcgctcgacggcgaggcgcgcggtgacaagcgcgagaccggcctgccggatttc
accgaggtgctcgactggctgaccgagcagatgggcaaggacatgaccgcgctggccgcc
ggtgcgccgctgccggcattcggcgatgaatccgcgtgccgctattgcgccgagcgcggc
ttgtgccgcaagggctactggaccgccggcgcaccgcgcgaaccgcagccggaaacggag
gggcagccgtga
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