Ralstonia solanacearum CFBP2957: RCFBP_20319
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Entry
RCFBP_20319 CDS
T01272
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc03410
Base excision repair
rsc03430
Mismatch repair
rsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCFBP_20319 (recJ)
03430 Mismatch repair
RCFBP_20319 (recJ)
03440 Homologous recombination
RCFBP_20319 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_20319 (recJ)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RCFBP_20319 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RCFBP_20319 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RCFBP_20319 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CBJ43511
LinkDB
All DBs
Position
2305798..2307495
Genome browser
AA seq
565 aa
AA seq
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MTRIAIRPHSAETASLLAGHGIHPVLARILAARGVARPSELSTELTDLLPPAQLKGIDDA
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
VALAAREQPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
CGFPSKHLAGVGVMFYVLLALRAELRSRGTFTQQNQPRLDALLDLVALGTVADVVRLDAN
NRLLVAQGLKRMRAGRMCAGIAALFRVSGREARRASTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILSSALASMDGAGRHTVAVYN
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRCPGL
IVKFGGHAMAAGLSLRADGFDRFVETFEAVGREWLNEALLSRVLETDGEAEPECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFEAIWFNHAEPLGASA
YVAYRLDNNTFNGITRVQMVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgccatccgtccgcattccgccgaaaccgccagcctgctggccggccac
ggcatccatcccgtcctggcccgcatcctggccgcgcgcggcgtcgcccgccccagcgag
ctgtcgaccgagctgaccgacctgctgccgcccgcgcagctcaagggcatcgacgacgca
gcgcgctacctggccgacgccatcgccgccggcaagcgcctgctgatcgtcgccgactac
gactgcgacggcgccaccgcctgcgcggtcggcgtgcgcgggctgcgtatgctgggcgcg
caggtcggttacatcgtgcccaaccgcttcgaatacggctacggcctgtcgcccgagatc
gtagccctggccgcgcgcgagcagcccgatgtgctcgtcaccgtcgacaacggcatcgcc
gacgtcgcgggcgtggcggcggccaacgcgctgggcatcgacgtcgtcgtcaccgatcac
cacatgccgggcgcgcaactgcccgaggcgcgcgtgatcgtcaacccgaaccagccgggc
tgcggcttcccgagcaagcacctggcgggcgtgggcgtgatgttctacgtcttgctggca
ctgcgggccgagctgcgcagccgcggcaccttcacgcaacagaaccagccgcgcctcgat
gcactgctcgatctggtggcgctcggcaccgtggccgacgtggtccggctcgatgccaac
aaccggctgctggtggcgcagggcctcaagcgcatgcgcgcgggccggatgtgcgccggc
atcgcggcgctgttccgcgtgtccgggcgcgaggcgcggcgcgcctccaccttcgacctc
ggctttggcctgggcccgcgcctgaacgccgccggccgcctggccgacatgtcgctcggc
atcgaatgcctgctgaccgacgatttcgaccgcgccatggccatcgccgccgaactcgac
ggcatgaaccgcgagcgccgcgagatcgaagccggcatgcagcaggaggccatggcgatc
ctgtcgtccgcgctggccagcatggacggcgccggccgccacaccgtcgcggtctacaac
gagacgtggcaccagggcgtgatcggcatcgtcgcctcgcgcctcaaggacaagttccac
cggccggtgatcaccttcgcgccgggcgacgacggcgtcatcaagggctcgggccgctcc
atccccggcttccacctgcgcgacgcgctggacgccgtgcacaagcgctgccccgggctg
atcgtcaagttcggcggccacgcgatggcggccgggctgtcgctgcgcgcggacggcttc
gaccggttcgtcgagaccttcgaagcggtcggccgcgaatggctgaacgaggccctgctc
tcgcgcgtgctcgaaaccgacggcgaagccgagccggagtgcttcacgccgcagttcgtg
gagctgctcgaaacccacgtctggggccagggcttcccggcgccgagcttctgcggcgag
ttcgacgtgctgtcgcaggccgtgctgaaggacaagcacctgaagctgcagctcgggcgc
ggcaagcagcgcttcgaggcgatctggttcaaccacgcggagccgctcggcgcctcggcg
tacgtggcctaccggctggacaacaacaccttcaacggcatcacccgcgtacagatggtg
atcgaacatgcgcagtag
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