Ralstonia solanacearum CFBP2957: RCFBP_20571
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Entry
RCFBP_20571 CDS
T01272
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta (IHF-beta)
KO
K05788
integration host factor subunit beta
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsc03032
]
RCFBP_20571 (ihfB)
03036 Chromosome and associated proteins [BR:
rsc03036
]
RCFBP_20571 (ihfB)
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_20571 (ihfB)
DNA replication proteins [BR:
rsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RCFBP_20571 (ihfB)
Chromosome and associated proteins [BR:
rsc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RCFBP_20571 (ihfB)
DNA repair and recombination proteins [BR:
rsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RCFBP_20571 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CBJ43758
LinkDB
All DBs
Position
complement(2527357..2527779)
Genome browser
AA seq
140 aa
AA seq
DB search
MPMTKSELVEKLAARFPQLLLRDADIAVKTILDAMSDALADGHRIEIRGFGSFGLNRRPP
RVGRNPKSGEKVLVPEKRVPHFKAGKELRERVDRSLERQGETSSEGEPVLLAAVKAARQA
GGHHAAGFPAEATPTLAMSR
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaccaagtccgaactcgtggagaaattggccgcccgctttccgcagctgctg
ctgcgggacgcggacatcgcggtcaagacgatcctggatgcgatgtccgacgccctggcg
gacggccatcgcatcgagattcgcgggtttggcagctttggcctgaatcggcgtccgccg
cgtgtcgggcgcaaccccaagtccggcgagaaggtgctggtgcccgaaaaacgggtgccg
cacttcaaggcgggcaaggagttgcgcgaacgggtcgaccgcagcctcgagcggcagggc
gaaacctcttcggagggcgagcccgtgttgctggcggctgtgaaggcggcgcggcaagcc
ggcggtcatcatgccgccggttttccggcggaggcgacgccaacgttggccatgtcgcgc
tga
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integrated database retrieval system
