Ralstonia solanacearum CFBP2957: RCFBP_20684
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Entry
RCFBP_20684 CDS
T01272
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc00260
Glycine, serine and threonine metabolism
rsc00460
Cyanoamino acid metabolism
rsc00630
Glyoxylate and dicarboxylate metabolism
rsc00670
One carbon pool by folate
rsc00680
Methane metabolism
rsc01100
Metabolic pathways
rsc01110
Biosynthesis of secondary metabolites
rsc01120
Microbial metabolism in diverse environments
rsc01200
Carbon metabolism
rsc01230
Biosynthesis of amino acids
rsc01240
Biosynthesis of cofactors
rsc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCFBP_20684 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RCFBP_20684 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RCFBP_20684 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RCFBP_20684 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RCFBP_20684 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RCFBP_20684 (glyA)
Enzymes [BR:
rsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RCFBP_20684 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
CBJ43870
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Position
2642756..2644003
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AA seq
415 aa
AA seq
DB search
MFERSRYTIDQIDPEVFAAIQQENQRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGM
SLAEGGHLTHGMALNMSGKWFNVVSYGLNAQEDIDYDALEALAQEKKPKLIIAGASAFAL
RIDFERIGKIAKSIGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEHEKAVNSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKTYQEQVVKNARALAETL
MARGLRIVSGRTESHVMLVDLRAKQITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFKEAEAVKVAHLIADVLDNPHDEANIAAVRAKVAELTKQYPVYA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacgcagccgctatacgatcgaccagatcgaccccgaagtcttcgccgccatc
cagcaggaaaaccagcgccaggaagaccacatcgagctgatcgcctccgagaattacacc
tcgccggccgtgatggccgcccagggctcgcagctgaccaacaaatacgccgagggctac
cccggcaagcgctactacggtggctgcgaatacgtggacgtggtcgaacagctcgccatc
gaccgcgtgaagcaactcttcggcgccgaagccgccaacgtgcagccgaactccggctcg
caggccaaccagggggtgttcttcgccgtgctcaagccgggcgacaccatcatgggcatg
agcctcgccgaaggcggtcacctgacccacggcatggcgctcaacatgagcggcaagtgg
ttcaacgtggtcagctacggcctgaacgcgcaggaagacatcgactacgacgcactcgaa
gcgctggcgcaagagaagaagcccaaactcatcatcgccggcgcgtccgcattcgcgctg
cgcatcgatttcgagcgcatcggcaagatcgccaaatcgatcggtgcgtacttcatggtg
gacatggcccactacgccggcctgatcgccgcgggcgtgtacccgaacccggtgccgcac
gccgacttcgtcaccacgaccacccacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagcacgagaaggccgtcaactcggcgatcttccccggcatccagggc
ggcccgctgatgcacgtgatcgccggcaaggcagtggcgttcaaagaagccctgtcgccg
gagttcaagacctatcaggaacaggtggtgaagaatgcacgcgccctggccgaaacgctg
atggcccgcggcctgcgcatcgtctccggccgcaccgagagccacgtgatgctggtcgac
ctgcgcgccaagcagatcaccggcaaggaagccgagaaggtgctgggcgacgcgcacatc
accgtcaacaagaacgccatcccgaacgatccggagaagcccttcgtgacctccggcatc
cgcctcggctcgccggccatgaccacgcgcgggttcaaggaagccgaggccgtgaaggtg
gcccacctgatcgccgatgtgctggataatccgcatgacgaagcgaacatcgcggccgtg
cgcgccaaggtggccgaactgaccaagcagtacccggtctacgcctga
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