Ralstonia solanacearum CFBP2957: RCFBP_20742
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Entry
RCFBP_20742 CDS
T01272
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsc03400
]
RCFBP_20742 (phr)
Enzymes [BR:
rsc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RCFBP_20742 (phr)
DNA repair and recombination proteins [BR:
rsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RCFBP_20742 (phr)
Prokaryotic type
RCFBP_20742 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1494
Motif
Other DBs
NCBI-ProteinID:
CBJ43927
LinkDB
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Position
2698507..2700075
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AA seq
522 aa
AA seq
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MPRPSPAEPSSAAQTHAYRIDAHFRRGLVWFRRDLRHIDHAALHYALRHCREVFCAFVFD
RGILDPLLARGLRADRRVEFIRAAVEALRSALREAGGELIVLHDHAHHAIPSLAQQLGVE
AVFANHDEEPAALARDAAVRDALARQPCAWFDFKDQVIFERAEVLNGQGKPYGVFTPYKN
AWLAAVSPFDLRAYPIEPHLHALARPPQGLAPATPSLEAMGFARSNLSVIALPTGMSGAE
ALLDDFATRMDDYHARRDYPAVRGPSYLSTHLRFGTVSIRTLAARAHSAMLHGSRGAATW
LSELIWRDFYFMILHHRPDLAEGTSFRPEFDRIRWVGGETGDVRFAAWRDARTGYPLVDA
AMLQIRQSGYMHNRLRMVTASFLIKDLGVDWRRGEHHFADALNDFDFAANNGGWQWAASS
GCDAQPWFRIFNPVTQSEKFDPQGHFIRKYLPQLAKLPDRYLHAPWTAPADVLKAAGVAL
GATYPRPIVEHAAARAATLARYAPAKVERTSGARAAALHRED
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcccatcgcccgccgagccctcgtccgccgcgcaaacccacgcctatcgcatc
gacgcgcatttccggcgcgggctggtctggttccggcgcgatttgcggcacatcgaccac
gcagcgctgcattatgccctgcgccattgccgcgaggtcttctgtgccttcgtgttcgac
cgcggcatcctcgatccgctgctggcgcgcgggctccgggcggaccgacgcgtcgagttc
atccgggcggccgtcgaggcactccgcagtgcattgcgcgaggccggcggcgaactgatc
gtgttgcacgaccatgcgcaccatgccatccccagcctagcgcaacaattgggcgtggaa
gccgtcttcgccaaccacgacgaggaacccgccgccctcgcccgcgacgcggcagtgcgc
gacgcattggcccggcagccgtgcgcgtggttcgacttcaaggaccaggtgatcttcgag
cgcgctgaggtcctcaacggccagggcaaaccctatggcgtgttcacgccgtacaagaac
gcctggctggccgccgtgtcgccgttcgacctgcgggcctatccgatcgagccgcacctg
catgccctggccaggccgccgcaaggactggccccggccacgccctcgctggaggccatg
ggcttcgcgcgctccaacctgtcggtgatcgcgctgccaaccggcatgtcgggtgccgag
gccctgctcgacgacttcgcgacccgcatggacgactaccacgcacgccgcgactatccc
gccgtgcgcggaccgagctacctgtcgacgcacctgcgcttcggcaccgtgtcgatccgt
acgctggccgcccgcgcccactcagccatgctgcacggcagccggggcgcggcgacgtgg
ctgtcggaactgatctggcgcgacttctatttcatgatcctgcaccatcgaccggatctg
gccgagggcacatcgttccgccccgaattcgaccgcatccgctgggtgggcggcgaaacc
ggcgacgtccgcttcgcggcgtggcgggatgcgcgcaccggctatccgctggtggatgcc
gccatgctgcagatccggcagagcggctacatgcacaaccgcctgcgcatggtcacggcc
agtttcctgatcaaggacctgggtgtcgactggaggcgcggcgagcaccactttgccgac
gcgctcaacgatttcgacttcgccgccaacaacgggggctggcagtgggcggcctccagc
ggctgcgatgcacagccgtggttccgcatcttcaacccggtgacgcaatcggagaaattc
gatccgcagggtcacttcatccgcaaatacctgccgcagctggccaagctgccggacagg
tacctccacgcaccgtggacggcgccggccgacgtgttgaaggcagccggcgtggcgctg
ggcgcaacgtacccacggccgatcgtcgagcatgccgccgcgcgggccgcgacgctggcg
cgctacgcacccgccaaggtcgaacggacatccggcgcgcgggccgccgccctgcaccgc
gaggattga
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