Ralstonia solanacearum CFBP2957: RCFBP_21263
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Entry
RCFBP_21263 CDS
T01272
Name
(GenBank) conserved protein of unknown function
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsc03016
]
RCFBP_21263
Enzymes [BR:
rsc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
RCFBP_21263
Transfer RNA biogenesis [BR:
rsc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
RCFBP_21263
Prokaryotic type
tRNA splicing ligases
RCFBP_21263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
CBJ44438
LinkDB
All DBs
Position
complement(3211910..3213130)
Genome browser
AA seq
406 aa
AA seq
DB search
MSNTHYNTLHVDQGADIKLWTQGVPVEDEARQQLMNTAKMPFIFKHMAVMPDVHLGKGST
IGSVIPTRGAIIPAAVGVDIGCGMMAARTTLTAADLPDNLHGLRSAIEAAVPHGRTPGAR
DKGAWNTPPATVDAMWAELVEGFNRITDKYPRLKKTNHHKHLGTLGTGNHFIEVCLDEEN
RVWFMLHSGSRGVGNAIGNLFIELAQADMRQHIANLPHRDLAYFEEGSQHFDDYVEAVGW
AQDYARRNRATMMQNVIAAARKVIAKPFAADVEAVNCHHNYVQRETHFGHDVLVTRKGAV
SAQKGQLGIIPGSMGAKSFIVRGLGNEEAFCSCSHGAGRTMSRTQAKKRYTVDDQVRATA
HVECRKDVDVIDEIPMAYKDIDAVMAAQADLVEIVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacccactacaacaccctccacgtcgaccagggcgccgacatcaagctgtgg
acccaaggcgtgccggtcgaagacgaggcccgccagcaactgatgaacacggcgaagatg
ccgttcatcttcaagcacatggcggtgatgccggacgtgcacctgggcaaggggtcgacc
atcggcagtgtgatcccgacgcgcggcgcgatcatcccggcggcggtgggcgtggacatc
ggctgcggcatgatggccgcccgcaccacgctcacggcggcggatctgccggacaacctg
cacggcctgcgcagtgccatcgaagcggcggtgccgcacggccgtacgccgggcgcgcgc
gacaagggcgcgtggaatacgccgccggccacggtcgatgcgatgtgggcggaactggtc
gagggcttcaatcggatcaccgacaagtacccgcggctcaagaaaacgaaccaccacaag
cacctcggaacgctcggtaccggcaaccacttcatcgaggtctgcctggatgaagagaac
cgcgtctggttcatgctgcactccggttcgcgcggcgtgggcaatgcgatcggcaacctg
ttcatcgaactggcgcaggccgatatgcggcagcacatcgccaacctgccgcatcgcgac
ctggcgtatttcgaggaaggcagccagcacttcgacgactacgtggaggcggtgggctgg
gcgcaggactacgcacgccgcaaccgcgccacgatgatgcagaacgtgatcgcggccgcg
cgcaaggtcatcgccaagccgttcgcggccgacgtggaagcggtgaactgccaccacaac
tacgtgcagcgcgagacccacttcggccacgacgtgctggtgacgcgcaagggcgcggtg
tcggcgcagaaggggcagctcggcatcattccgggttcgatgggggcgaagagcttcatc
gtgcgcgggctgggcaacgaagaggcgttctgctcgtgtagccacggcgcgggccgcacc
atgagccgcacgcaggccaagaagcgctacacggtggacgaccaggtccgcgccaccgcg
cacgtggagtgccgcaaggatgtcgacgtcatcgacgaaatcccgatggcgtacaaggac
atcgacgccgtgatggccgcgcaggcggacctggtggagatcgtccatacgctgcggcag
gtggtgtgcgtgaaggggtag
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