Ralstonia solanacearum CFBP2957: RCFBP_21265
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Entry
RCFBP_21265 CDS
T01272
Symbol
rtcR
Name
(GenBank) sigma 54-dependent transcriptional regulator of rtcBA expression
KO
K14414
transcriptional regulatory protein RtcR
Organism
rsc
Ralstonia solanacearum CFBP2957
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsc03000
]
RCFBP_21265 (rtcR)
Transcription factors [BR:
rsc03000
]
Prokaryotic type
Other transcription factors
Others
RCFBP_21265 (rtcR)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_22
AAA_30
ATPase_2
AAA_19
NACHT
MCM
AAA_33
AAA_7
BrxC_BrxD
TniB
AAA_14
AAA_2
DUF815
DUF6213
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CBJ44440
LinkDB
All DBs
Position
3213776..3215383
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AA seq
535 aa
AA seq
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MQKTVAIGFVGTVLDYAGKGNQRWERWRPSVGLCQQEDLVIHRLELLHDARSRGLFERLR
DDIAAVSPETEVRSVEIQLRDPWDFEEVYGTLHDFARGYAFDTDAEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLVQTSPPRKKEPGNIVGSYALIDLDLSRYDKIATRFARERADTMS
QLKAGIATRNPAFNRMIEQIERVASRSKAPMLLFGPTGAGKSFLARRVYEMKKARHQLGG
RFVEVNCATLRGDSAMSALFGHVKGAFTGAQTDRAGLLRSADGGLLFLDEIGELGLDEQA
MLLKAIEEKRFLPFGSDREVESDFQLIAGTVRDLRQWVAEGRFREDLFARINLWTFDLPG
LAERPEDIEPNLDYELARFAREHGEQVRFHTEARRAYLKFVASPQARWSGNFRELSASVT
RLATLAEGGRITEACVEAEIGRLRRAWSVADAATGDGILAGLLGDGAATLDQFDRVQLEH
VIRVCRESASLSEAGRRLFDVSRLEKAKVNDADRLRKYLARFGLDWQQVRGQAAT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaccgtggccatcggcttcgtcggcaccgtgctcgactacgcgggcaagggc
aaccagcgctgggagcgctggcgcccctcggtcgggctgtgccagcaggaagacctggtc
atccaccggctggaattgctgcacgacgcgcgcagccgcggcctgttcgagcgcctgcgg
gacgacatcgccgccgtctcgccggagaccgaggtgcgcagcgtcgagatccagttgcgc
gacccgtgggatttcgaggaggtctacggcacgctgcacgacttcgcccgcggctacgcg
ttcgacaccgacgccgaggactacctgatccacatcaccacgggcacccacgtggcacag
atctgctggttcctgctggccgaggcgcgctacctgccggcccggctggtgcagacctcg
ccgccgcgcaagaaggagccgggcaacatcgtgggcagctatgccctgatcgatctcgac
ctgtcccgctacgacaagatcgccacgcgcttcgcgcgcgagcgcgcagacacgatgtcg
caactgaaggccggcattgccacgcgcaatccggcgttcaaccgcatgatcgagcagatc
gagcgggtggcgtcgcgctcgaaggcgccgatgctgctgttcggcccgaccggcgccggc
aagtcgttcctggcgcggcgcgtgtacgagatgaagaaggcacgccaccagctgggcggg
cgctttgtcgaggtgaactgcgccacgctgcgcggcgacagcgccatgtcggccctgttc
ggccacgtcaagggcgccttcaccggcgcgcaaaccgaccgcgccgggctgctgcgcagc
gcggacggcggcctgctgttcctggatgagatcggcgaactcgggctggacgagcaggcc
atgctgctcaaggctatcgaagagaaacgcttcctgccgttcggcagcgaccgcgaggtg
gagagcgacttccagctgatcgccggcaccgtgcgggacctgcggcaatgggtggccgag
gggcgcttccgcgaagacctgttcgcgcgcatcaacctgtggaccttcgacctgcccggc
ctggccgagcgcccggaagacatcgagcccaatctcgactacgaattggcgcgcttcgcc
cgcgaacacggcgagcaggtgcgcttccacaccgaggcgcggcgcgcttacctgaagttt
gtcgcctcgccccaggcgcgctggagcggcaacttccgcgagctgtcggcgtcggtcacg
cgcctggccacgctggccgaaggcggccgcatcaccgaggcctgcgtggaagcggaaatc
ggccggctgcggcgcgcctggtccgttgccgacgcggccacgggcgacggcatccttgcc
gggctgctgggggacggtgcagcaacgctggaccagttcgaccgcgtgcagttggaacac
gtcatccgggtctgccgggaatcggcctcgctgtctgaggcggggcgccggctgttcgat
gtgtcgcggctggagaaagccaaggtcaacgatgcggaccggctgcgcaagtatctcgcc
cggttcggcctggactggcagcaggtgcgcggccaggcggcgacttag
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