Ralstonia solanacearum CFBP2957: RCFBP_21316
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Entry
RCFBP_21316 CDS
T01272
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rsc
Ralstonia solanacearum CFBP2957
Pathway
rsc00300
Lysine biosynthesis
rsc00470
D-Amino acid metabolism
rsc01100
Metabolic pathways
rsc01110
Biosynthesis of secondary metabolites
rsc01120
Microbial metabolism in diverse environments
rsc01230
Biosynthesis of amino acids
Module
rsc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCFBP_21316 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RCFBP_21316 (dapF)
Enzymes [BR:
rsc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RCFBP_21316 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF6324
Motif
Other DBs
NCBI-ProteinID:
CBJ44491
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All DBs
Position
complement(3267897..3268775)
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AA seq
292 aa
AA seq
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MKLHFTKMHGAGNDFVVLDGIETPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDF
RYRIFNHDGGEVEHCGNGARCFVKFVTDRGLTDKRTIRVEVMHGIATLTMQPDGQVTVDM
GAPVFEAARLPFVPDGLPTRVEGRDAQHALQVNGRTAWLSTVSMGNPHAVQVVDDTEAFP
VLEDGPLIESHAVFPRRVNAGFMEIVDRHAIRLRVYERGAGETLACGTGACAAVVAGIRR
GLLDSPVKVATHGGGLTIAWAGEGEPVMMTGPATTVFEGTLDLDALKPTAAH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcatttcaccaagatgcacggtgccggcaacgacttcgtcgtgctcgacggc
atcgagaccccgatcgacttcacccccgagcagtggcgcgccatcgccgaccgccacttc
ggcgtgggtgccgaccagttgctgctggtggagcgctccacccgccccgatgtcgatttc
cgctaccgcatcttcaaccatgatggcggcgaggtggagcattgcggcaacggcgcgcgc
tgcttcgtcaagttcgtcaccgaccgcggcctgaccgacaagcgcaccatccgcgtggaa
gtgatgcacggcatcgctacgctgacgatgcagcccgacggccaagtgacggtcgatatg
ggtgccccggtgttcgaggccgcgcgcctgcccttcgtgcccgatggcctgcccacccgc
gtggagggccgcgatgcgcagcacgccctgcaggtcaacggccgtaccgcatggctgtcc
accgtgtcgatgggcaatccgcatgcggtgcaggtggtcgatgacaccgaggccttcccc
gtgctggaggacggcccgctgatcgaatcgcacgccgtgtttccccggcgcgtgaatgcc
ggcttcatggagatcgtcgaccgccatgccatccgtctgcgcgtgtacgagcgcggcgcc
ggcgagacgctggcctgcggcaccggcgcctgcgcggcggtggtggccggcatccgccgc
ggcctgctggattcgcccgtcaaggtggccacgcatggcggcggcctgaccattgcctgg
gccggcgagggcgagccggtgatgatgaccggcccggccacgaccgtgttcgaaggcacg
ctggacctggatgcgctgaagccgaccgccgcgcactga
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