KEGG   Ralstonia solanacearum CFBP2957: RCFBP_21316
Entry
RCFBP_21316       CDS       T01272                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rsc  Ralstonia solanacearum CFBP2957
Pathway
rsc00300  Lysine biosynthesis
rsc00470  D-Amino acid metabolism
rsc01100  Metabolic pathways
rsc01110  Biosynthesis of secondary metabolites
rsc01120  Microbial metabolism in diverse environments
rsc01230  Biosynthesis of amino acids
Module
rsc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rsc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RCFBP_21316 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RCFBP_21316 (dapF)
Enzymes [BR:rsc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RCFBP_21316 (dapF)
SSDB
Motif
Pfam: DAP_epimerase DUF6324
Other DBs
NCBI-ProteinID: CBJ44491
LinkDB
Position
complement(3267897..3268775)
AA seq 292 aa
MKLHFTKMHGAGNDFVVLDGIETPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDF
RYRIFNHDGGEVEHCGNGARCFVKFVTDRGLTDKRTIRVEVMHGIATLTMQPDGQVTVDM
GAPVFEAARLPFVPDGLPTRVEGRDAQHALQVNGRTAWLSTVSMGNPHAVQVVDDTEAFP
VLEDGPLIESHAVFPRRVNAGFMEIVDRHAIRLRVYERGAGETLACGTGACAAVVAGIRR
GLLDSPVKVATHGGGLTIAWAGEGEPVMMTGPATTVFEGTLDLDALKPTAAH
NT seq 879 nt   +upstreamnt  +downstreamnt
atgaaactgcatttcaccaagatgcacggtgccggcaacgacttcgtcgtgctcgacggc
atcgagaccccgatcgacttcacccccgagcagtggcgcgccatcgccgaccgccacttc
ggcgtgggtgccgaccagttgctgctggtggagcgctccacccgccccgatgtcgatttc
cgctaccgcatcttcaaccatgatggcggcgaggtggagcattgcggcaacggcgcgcgc
tgcttcgtcaagttcgtcaccgaccgcggcctgaccgacaagcgcaccatccgcgtggaa
gtgatgcacggcatcgctacgctgacgatgcagcccgacggccaagtgacggtcgatatg
ggtgccccggtgttcgaggccgcgcgcctgcccttcgtgcccgatggcctgcccacccgc
gtggagggccgcgatgcgcagcacgccctgcaggtcaacggccgtaccgcatggctgtcc
accgtgtcgatgggcaatccgcatgcggtgcaggtggtcgatgacaccgaggccttcccc
gtgctggaggacggcccgctgatcgaatcgcacgccgtgtttccccggcgcgtgaatgcc
ggcttcatggagatcgtcgaccgccatgccatccgtctgcgcgtgtacgagcgcggcgcc
ggcgagacgctggcctgcggcaccggcgcctgcgcggcggtggtggccggcatccgccgc
ggcctgctggattcgcccgtcaaggtggccacgcatggcggcggcctgaccattgcctgg
gccggcgagggcgagccggtgatgatgaccggcccggccacgaccgtgttcgaaggcacg
ctggacctggatgcgctgaagccgaccgccgcgcactga

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