Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_133
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Entry
TGRD_133 CDS
T00755
Name
(GenBank) exodeoxyribonuclease V beta chain (RecB)-like protein
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAG13619
UniProt:
B1GZD7
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All DBs
Position
complement(208666..211740)
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AA seq
1024 aa
AA seq
DB search
MNKSQIISVLASAGTGKTYNLAKRYLYLLLSSNDNTSIKNIIAVTFTNKAAVEMKYRVID
YLKKAALSLDTGDFFDELELTKDKIAQRSAAVLKDIFKFYDNFNISTIDSFKNRILKSCA
MSIDISPNFVIEQDYSDNLLFSLEIFLQKARTSENLRNIILQYLSQYLMKDSGWFPKNNI
YNEIEKVFKESGNTGKDIMPYEGVPFRNEIASRSAAIIRKIKKFAVLLPNIQAKKYYSEA
VEKVLSTGGKIFFSMDIPVRFAYETIKYIKDAKINAEADELWSEINKDIKSLCDFYMENY
YSVYSYIYSKVAFEFDLRSKKDGIVFLNEINKKTVGFFEKDNTVMPEVYYRLSEKYKHFL
IDEFQDTSLVQWVGIKRFLEESLAEGGTFFYVGDIKQAIYAFRGGEPEIFDAPSRDFFSA
DVNIKTLNQNFRSGRTIVDFNNDIFSKENIERFLNEFYKKKNIECGFSKFIKTYSFLRQE
TPAEHNYGYIEIDVIDKTCENVKEKIKQRFINCVAQVSERFNPKDITTLCRANDEVLTVS
SWLLENDFDVESSQTLNIRNNSVIKQIISLLMFINSPIDALSFSSFILGDIFSKISGIEN
VEFEKFIFACNKRNRAGTFYKTFQDRYENLWDKYFKDFFVKDGFAPVYELTLAALEKFKV
TDNFSDSRAFIMRFLELVKDFETQGSGIKNFLEYFDDLKDNEESLYIKSALGNGIKVMTV
HKAKGLQFPVVIIPFLKLSVKPDRKPYFDSSGNKIKLFNISKNITKFSHKAKEIYDREKI
SSLLSELNVTYVSMTRAEYELYAIVPPKSGISNNEIPVLLGNKALTSGVKQTYAQDNNGK
DNIVKDSFDSGYKDIQKYLKNVDKTTLDINNSSKKNSIICYALSKITSLKNKNINDCISY
ALRITKRKFFFEDVKFCREKLNRLFATKKILDLFMHDEKYICNEKKIVNSAGETFRIDKL
IVLDDEVITADFQISNDKEEKNKKQVEYRNTLIAEIYPGKKISAYIADIDTADCLLLKRQ
TLLL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctcaaataatttcagtgctggcatccgcaggaacaggcaaaacatataat
cttgcaaaaagatatctttatcttttgctcagttccaacgataacaccagcataaaaaat
ataatagctgtaacttttactaacaaagcggctgtagaaatgaagtacagagtcatagat
tatcttaaaaaagcagctttgtctttggataccggtgatttttttgacgagttagaactt
acaaaagacaaaatagcccaaagaagcgccgcagttttaaaagatatttttaagttttac
gataactttaacataagcaccatagacagttttaaaaaccgtatcttaaaatcctgcgct
atgagcattgatatttcgccgaactttgttatagagcaagattattcggacaatctttta
ttttccttagaaatctttctgcaaaaagcgcggacctcggaaaacctgagaaacattata
ttgcagtatctgtctcagtatttaatgaaagattccggttggtttcctaaaaacaatatc
tacaatgaaattgaaaaagttttcaaagagtcaggaaatacaggaaaagatattatgccg
tacgaaggagtacctttcagaaacgaaattgcttcaagaagtgcggcaattatcagaaaa
atcaaaaaatttgcagtacttcttcccaatattcaggcaaagaaatattattcggaagct
gttgaaaaagttttaagcaccggcggaaaaatatttttctcaatggatattcctgtaaga
ttcgcatacgaaaccattaaatacataaaagacgctaaaattaacgccgaagcagacgag
ctttggagcgaaataaacaaagatattaaatctctatgcgatttttatatggaaaactat
tacagcgtttattcatatatatactcaaaagtcgcatttgaatttgacctgcggtcaaaa
aaagacggcattgtatttttaaatgaaataaataaaaaaacagtcggtttttttgaaaaa
gataacactgttatgcccgaagtatattacagattatcagaaaaatataagcatttttta
attgatgaatttcaggatacgagccttgtgcagtgggtaggaatcaaaagatttctggaa
gaaagtcttgccgaaggaggaacgtttttctacgtcggcgacataaaacaagcaatatac
gctttcaggggcggggaacccgagatttttgatgcgccgtcaagggattttttttctgcg
gatgtcaacataaagaccctcaaccaaaattttagaagcggcaggactatcgtagatttt
aacaacgatattttttcaaaagaaaatatcgagagatttctaaatgaattttacaaaaag
aaaaatattgaatgcggtttttcaaagtttatcaaaacttattctttccttcgtcaggaa
acgccggcagagcataattacggttatattgaaatagacgtaatagataaaacctgcgaa
aacgttaaagaaaaaataaaacaaagatttataaactgcgttgctcaggtatcggaaagg
tttaatcccaaagacataactactttatgcagagcaaacgatgaagtgcttacggtgagt
tcatggcttttggagaacgattttgacgtagaatcatcgcagactttaaatataagaaac
aacagcgtcataaaacagatcatatcactgcttatgtttattaactctcccatagatgcg
ctgtctttctcctcttttatccttggagatattttcagtaaaatttcaggtattgaaaac
gttgaatttgaaaagtttatttttgcctgtaacaaaagaaacagagctggaactttttac
aaaaccttccaagacagatatgaaaatctgtgggacaaatattttaaagatttttttgtg
aaagacggtttcgcacctgtctatgagttaactcttgcagcgcttgaaaagtttaaagtt
actgataatttttctgacagcagagcgtttataatgcgttttttggaactcgtaaaagat
tttgaaacacagggttcggggattaaaaactttttagaatatttcgacgatttaaaagac
aatgaagaatctttatatataaaaagcgcgctcggaaacggcataaaagttatgacggta
cataaagcaaaagggcttcaatttcctgtagtgataattccttttctcaaactttcagta
aagcccgacagaaaaccctattttgacagctcaggcaataaaataaaactgtttaacata
tcgaaaaacattacaaagttttcacacaaagctaaggaaatatacgacagagaaaagata
agttctttattgtctgaactcaatgtgacgtacgtttcaatgacaagagccgaatatgaa
ctttacgcgatagttcctccgaaatccggaatttcaaataatgagattccggtactactg
ggaaacaaagctctcacttcaggcgttaagcaaacatacgctcaggacaacaacggaaaa
gacaacattgtcaaagattctttcgactccggatataaagatatacaaaaatatttaaaa
aacgtagataaaacgacgcttgatataaacaacagcagtaaaaaaaattcaattatatgt
tatgccttgtcaaagataacgtcattaaaaaataaaaatataaacgactgtatcagttat
gcactcaggattacaaaaagaaaatttttctttgaagacgttaaattttgcagagaaaaa
cttaacagattatttgcaacgaaaaaaattctagatttgtttatgcatgacgaaaaatat
atttgcaacgaaaaaaaaatcgtaaattcggcaggcgaaactttcaggattgataagctg
atagtgcttgacgatgaagttataacagcagattttcaaatttcaaacgacaaagaagaa
aaaaataaaaagcaggtggagtatcgcaacactctcattgctgaaatttatcccggcaaa
aagatatcggcttatattgcagatattgacaccgcagattgtttattattgaaacgacaa
acgctactactttaa
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