Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_167
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Entry
TGRD_167 CDS
T00755
Name
(GenBank) biotin carboxyl carrier protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Pathway
rsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TGRD_167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsd03019
]
TGRD_167
03016 Transfer RNA biogenesis [BR:
rsd03016
]
TGRD_167
Enzymes [BR:
rsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TGRD_167
Messenger RNA biogenesis [BR:
rsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TGRD_167
Transfer RNA biogenesis [BR:
rsd03016
]
Prokaryotic type
tRNA degradation factors
TGRD_167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl
HlyD_3
Tsg
UVB_sens_C
Motif
Other DBs
NCBI-ProteinID:
BAG13651
UniProt:
B1GZG9
LinkDB
All DBs
Position
256050..256472
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AA seq
140 aa
AA seq
DB search
MVNDIKDEVRSLYEIMKEEKVQELEINSRNYSICIKRKDHDENNQTVQKKQIIVQEEPMV
SGETIKTPIAGVFYRSPSPSSPVFVNEGDIVNIGKTVCIIEAMKVMNEIKATFKAKILKM
LAENGKPVNSGQDLFEVEKV
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgatattaaagacgaagtaaggtctctttatgaaataatgaaagaggagaaa
gttcaggaacttgagataaactcaagaaattatagtatttgcataaagcgcaaagatcac
gatgaaaataatcagactgttcagaaaaaacaaattattgtgcaagaagagccgatggtt
tcaggtgaaactataaaaacgcctatagcgggcgtattttatagatctccgtcgccatcg
tctcctgtgtttgtaaatgagggagatatcgtaaatatcggaaagaccgtgtgtataatt
gaagcgatgaaagttatgaacgaaataaaagctacttttaaagctaagatattaaaaatg
ctggcggaaaacggaaaaccagtgaattcgggacaggacttgtttgaagtagaaaaagta
tga
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