Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_177
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Entry
TGRD_177 CDS
T00755
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Brite
KEGG Orthology (KO) [BR:
rsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsd03009
]
TGRD_177
Enzymes [BR:
rsd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
TGRD_177
Ribosome biogenesis [BR:
rsd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TGRD_177
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BAG13661
UniProt:
B1GZH9
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All DBs
Position
267974..269755
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AA seq
593 aa
AA seq
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MVRRNKKRISRKTVLVLIILAVFFLLFAKLVYVQIFLHGKINEAVKRMVSRKNIKISKRG
DILDSRGKILASSIEKYTVFLDPKIIEDFDKVKSILSENGIKVKEKSLNEFRKTSYVPVV
FNIDADTVDRIKNEKLKGIGFESRYLRQYPEGRLLAHILGIIGSDGNGLEGIEKTCNESL
SGDSIMTRAIRDGRGCIIQDEFIDKTRICGRNVKLNIDRTLQFIAEQELRRAFEKYKAKK
AICIIQNPKTGKILAMVSLPDFNSSDKIKDLGILRNSAISDIYEPGSTFKIVAVAAALEL
GKVKFTDSFYLEDGKYKIAGHTIKDDHKIKGNASLSGIMEQSSNIGMIKIAQKLGSGNFY
GYIRKFGFYSLTGVDLPGEARGLLKDVKNWNALSLPAISFGQGIGVTGLQMINAFSAIAN
DGVLMKPLVIENIGKADAATKAASTESAIAMHAMGTKEKPGNGMAEGVFEPKEIRRVVSI
ETARRVKKLLKSVVEFGTGRSAKISGYTVGGKTGTAQKVDPVLKTYSAKYYTVSFCGMVP
AMEPEIVILVIIDEPKGSSYYAASVASPVFANIAKRVAEYLGIKKDDKNESSF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaagaaacaaaaaacgaattagcagaaagactgtgttggtattgataatacta
gcagtcttttttcttttatttgcaaagcttgtatatgtgcagatttttttgcacggtaaa
ataaacgaagcagttaaaaggatggtaagtcgtaaaaatattaaaatctcaaaacgagga
gatattttggattcaagaggaaaaattcttgcttcaagcatagaaaaatatactgttttt
cttgatccgaaaataatagaagattttgataaggtgaaaagtattttgtccgaaaacgga
ataaaagtcaaagaaaaaagtttaaatgaattcaggaaaacgtcttatgttcccgtagtt
tttaatattgatgccgatactgttgatagaattaaaaatgagaaattaaaaggtattgga
tttgaaagcagatatttaaggcagtatccggagggcagacttcttgcacacattcttgga
ataataggatctgatggaaatgggcttgaaggtatcgagaaaacctgcaatgagtctttg
tctggagacagtattatgactagagcgataagagatgggcgtgggtgcataatacaggat
gaatttatcgataaaacaagaatatgcggacgaaatgttaaactcaatatagacaggacc
ctgcagtttatagctgaacaggaacttcggagagcttttgagaagtataaagcaaaaaaa
gcgatatgcataattcaaaatcctaaaaccggaaaaattcttgcaatggtttctctgcct
gattttaattcttcagataaaattaaagatttaggaattttaagaaattcagccataagc
gatatttatgagccaggatcgacttttaaaattgttgccgttgctgcggctttagagctg
gggaaagtaaaatttacggatagtttttatttggaagacggaaaatataaaattgctgga
catactataaaagatgaccacaaaattaaaggcaacgcatctttaagtggaattatggaa
caatcatcaaatataggtatgataaaaattgcgcaaaaacttggaagcggaaacttttac
ggatacataagaaaattcggtttttactctttaactggcgttgatttgccgggagaggca
agaggtcttttaaaagatgttaaaaactggaatgctttatctttacctgcgatttctttt
ggacagggcataggagttacggggcttcagatgataaacgctttttctgcgattgcaaat
gacggagtgttaatgaaaccgcttgtaatagaaaatataggaaaagctgatgctgctact
aaagcggcatcgactgaaagtgcgatagctatgcatgcgatggggactaaggaaaagcct
ggtaacggaatggcagagggtgtttttgaaccaaaagaaataagaagagttgtttccatt
gagactgcccgcagggtaaaaaaacttttaaaaagtgtcgtggagttcggaaccggcaga
agcgcaaaaatttcggggtataccgtaggcggaaaaaccggtacggcgcagaaagttgat
cctgtattaaaaacttattctgcaaaatattatactgtttcattttgcggtatggtgcct
gctatggaaccagaaattgtcatacttgttattattgacgaacctaaaggtagcagttat
tatgcggcttcggttgcatctcctgtttttgcaaacattgccaaaagagtggcggagtat
ttgggcattaaaaaagatgataagaatgagtcgtcattttag
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