Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_241
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Entry
TGRD_241 CDS
T00755
Name
(GenBank) DNA primase
KO
K02970
small subunit ribosomal protein S21
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Pathway
rsd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rsd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TGRD_241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rsd03011
]
TGRD_241
Ribosome [BR:
rsd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
TGRD_241
Bacteria
TGRD_241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_2
Toprim_4
Toprim
Toprim_3
DnaB_bind
TetR_N
Motif
Other DBs
NCBI-ProteinID:
BAG13726
UniProt:
B1GZP4
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All DBs
Position
361116..362882
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AA seq
588 aa
AA seq
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MVISEDTIEKIRLSNSIDSVIREYLPDLKRAGRNWKVCCPFHNEKTPSFIVSPEKGIFKC
FSCNVAGDVFKFVMFLDNISWIEAVKKLAKKTNIEIQEAKQGIIKLSENTKLFDILESSA
NFYNKCLLERASAQKAREYIKKRGINREAVNKFKIGFAPKGQFLQWALEKDYKDDDLLKA
GLITRTGRGIFFECMSERVVFPIFDVQGRIVAFGGRTIADHKIKYLNTPETAVYSKSSNL
YGLFQTLPELRKERKIIVLEGYIDAVILQQFGITGAVATLGTAFTQNHAKLVSRYSDSVT
LLFDSDNAGRTAAQRSLEILVGDSIECRVSALPEHVDADEYLNQYGKESFLKFLEDSSKS
AIDFMIERVLGGLSSDGRKSSPEIKAKAVSALLDFVARSTNSIIQREWIRDIAQHVDVNE
EAVWREFEKKQQLRLRGYLQYDKNSVEQTVKVKKDKKFSMSLEENLLNLILNNRDYIKKT
DSNCFEDARCRKIFELTVSGLNTVGILNTLSEEDKNWFAELILNTIEYSDIGEAFGIILR
DIDAGRLERERRRLEKEILLVSEGKKEKDKKVFDEYKKLTALLKGSGK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggttatatccgaagatacaattgaaaagataaggctttcaaatagcatagactctgtg
attagagaatacctgccggacttaaaaagagcgggacgcaactggaaagtctgctgtccg
tttcacaatgagaaaacgccgtcttttatagtaagccccgagaaaggaattttcaaatgt
ttcagttgcaacgttgcgggtgacgtttttaaatttgtgatgtttttagacaatatatcg
tggattgaagcggtaaagaaacttgcaaagaaaacaaatatagaaattcaggaggcaaaa
caaggtataataaaattgtccgagaatacaaaactgtttgatattttagaaagttcggct
aatttttataataaatgtttgcttgaaagagcgagcgcccaaaaagcaagagaatatatc
aaaaaacgcggtattaatcgcgaagcagtaaataaatttaagatagggtttgctcctaaa
ggacagtttttacagtgggcgttagaaaaagattataaagacgatgatcttttaaaggcg
ggattaataacaagaacaggaagaggaattttttttgaatgtatgtcggaaagagtggtt
ttcccgatttttgatgttcagggaagaattgtggcgtttggcggaaggactattgcagat
cataaaattaaatatttaaatactcccgaaaccgctgtttattctaaatcgtcgaatctt
tatggattatttcagacgttgcctgaacttcgtaaggaaagaaaaataattgttcttgaa
gggtatatagatgctgttattctgcagcagtttggaataacaggtgcggttgcgacgcta
gggactgcatttactcaaaatcatgcgaaattggtttcaagatattccgacagcgtcaca
ttactttttgattctgataatgcgggaaggacagctgcgcagagatctcttgaaattttg
gttggagacagtatagaatgcagagtgtctgctttacctgaacatgtcgatgctgatgag
tatctcaaccaatacggaaaagaaagctttttaaagtttctcgaagacagttctaaaagt
gcaatagattttatgattgaaagagttcttggcgggttgtcttccgatggaagaaagagt
tcacctgaaatcaaagcgaaagctgtatctgctcttttggattttgtcgcaagaagtacc
aattctataattcagagagaatggataagagatattgcgcagcatgtggatgttaatgaa
gaagcggtctggagagagtttgaaaaaaagcagcaactgagacttagaggttatttgcaa
tatgataaaaattcagttgaacaaactgtcaaagttaaaaaagataaaaaattttcaatg
tctttagaagaaaatcttttaaatcttattttaaacaatagagattatattaaaaaaact
gacagcaattgttttgaagacgctaggtgcaggaaaattttcgagcttacagtttcgggt
ttaaatactgtcggaatattaaatacattatcagaagaagacaaaaactggtttgcggaa
ctgatattaaacacaatagaatacagtgacatcggggaagctttcggcattattttaagg
gatattgatgccggcagacttgaaagagaaagacggcggcttgaaaaagaaattctttta
gtgagcgagggcaaaaaagaaaaagacaaaaaagtgtttgatgaatataagaagttaaca
gctcttttgaagggatcggggaaataa
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