Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_455
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Entry
TGRD_455 CDS
T00755
Name
(GenBank) holliday junction resolvasome DNA-binding subunit RuvA
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Pathway
rsd00290
Valine, leucine and isoleucine biosynthesis
rsd00660
C5-Branched dibasic acid metabolism
rsd01100
Metabolic pathways
rsd01110
Biosynthesis of secondary metabolites
rsd01210
2-Oxocarboxylic acid metabolism
rsd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
TGRD_455
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
TGRD_455
Enzymes [BR:
rsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
TGRD_455
4.2.1.35 (R)-2-methylmalate dehydratase
TGRD_455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAG13943
UniProt:
B1H0B1
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All DBs
Position
complement(669306..669920)
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AA seq
204 aa
AA seq
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MIDYLYGTLDSKSTDGITIDVNGIGYEISVPISTFLKLPETRNPIKIYIVESTAGMYGGV
ISLYGFFTIEEREMYLLIKDKVHGIGAKKAMEYTDKISKSFANFKTAIISKNPSMLNEIF
GFTKKTADKLIVALKDKISTVNVLNKEKQTGAETIKNTMVSEAIAGLITLGYKMQQARVA
VTNVYEHNENITLEDLIKKSLQYL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgatagattacttatatggaacccttgattcaaaatcaacagatggcataaccatcgat
gttaacggcatcggttatgaaatatcagtcccgatttcaacttttttaaaacttcctgaa
actagaaatccgataaaaatatatatagttgaatctaccgcgggaatgtatggcggagtt
atctctttgtacggtttttttacaatagaagaaagagagatgtatcttctcataaaagat
aaagttcatggaatcggtgccaaaaaagctatggaatataccgacaaaatttccaaatct
tttgcgaatttcaaaactgcgataatttcaaaaaatccgtcaatgctaaatgaaatattt
ggttttacaaaaaaaaccgcggacaaacttattgtcgctttaaaagacaaaatatccaca
gtaaatgttttaaacaaagaaaaacagacaggtgcagagacaattaaaaatactatggtt
tcggaagccatagcaggtcttataactttggggtataaaatgcagcaggcaagagttgca
gtaaccaatgtttacgaacacaatgaaaatattactctggaagacttaataaaaaaatct
ctgcagtatttataa
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