Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_540
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Entry
TGRD_540 CDS
T00755
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Brite
KEGG Orthology (KO) [BR:
rsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsd03019
]
TGRD_540
03009 Ribosome biogenesis [BR:
rsd03009
]
TGRD_540
Messenger RNA biogenesis [BR:
rsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TGRD_540
Ribosome biogenesis [BR:
rsd03009
]
Prokaryotic type
rRNA processing factors
TGRD_540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
WHEP-TRS
Motif
Other DBs
NCBI-ProteinID:
BAG14023
UniProt:
B1H0J1
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All DBs
Position
complement(784466..785932)
Genome browser
AA seq
488 aa
AA seq
DB search
MLKNTLNIQTEKTVKKEIIVNRTFEESRVAILDNGKLFNLFIERRESEKILNNIYKGRVK
NIVPALNSLFVDIGFGRGAYLDVCDILKEHRSKKNMIKAGQDIMVQVYKEPIHNKGAKVT
MAISLTGRLLVYMPFSNNIGVSKNIKDKHEYNRLKSMTAELKKDISGGIIIRTKAEKATK
AEIKNEIKYLIRLWASITERFDDAKPMSLIHKDLGLVFQTVIDYFSDDVIFMRIDSQKEL
KDVTDFVEIVLPEFLDRIVFYDDRTPIFKKYGIEEEIKRLCSNKVWLSSGGYLIIQEAES
LCAIDVNSGKFTAKSTQEDTAVITNLEAAEEIARQLRLRNIGGIIVIDFIDMKKASNRRK
VLETLRKATKVDKAKIEIWPITRLGLIEMTRERKRKSLFSILGDICPVCHGLSFVLSKES
IFINVCDEIKQLKIDGYDGRIKIKLNIDVIEYFMKKKARLEELFGVEFDIEASTELLREE
YKILYLNS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaatacgctaaacatccagacggagaaaacagtgaaaaaagaaataatagtt
aacagaacgtttgaagaatcaagagttgccatacttgacaacggcaaactttttaattta
tttattgaaagaagagaatctgaaaaaatattaaacaatatttataaaggcagagtgaaa
aatattgtgcctgcgcttaattcattatttgtggacataggttttggtagaggtgcctat
cttgatgtttgcgatatattgaaagagcatcgcagtaaaaaaaatatgattaaagccgga
caggacattatggttcaggtttataaagaaccgatacataacaaaggtgctaaagtaaca
atggctatttcccttacgggcaggcttttagtgtatatgcctttcagcaataatataggc
gtatcaaagaatattaaagataaacatgaatacaacagattaaaaagtatgactgcggag
cttaaaaaagatatttccggtggcataataataaggactaaagctgaaaaagctacaaaa
gcggaaattaaaaatgaaataaaatatttaataagactctgggcatccataacagaaaga
tttgacgatgctaagccgatgagtcttatacataaagacttgggacttgtttttcagacc
gtaatagattatttttctgacgatgtcatatttatgcgtatagattcgcaaaaagaactc
aaagatgttacggattttgttgaaatagtattgcctgaattccttgacaggattgttttt
tacgacgataggactccaatatttaaaaagtatggtatcgaagaggaaataaaaagattg
tgttccaacaaagtatggcttagttctggcggttatcttataatacaggaagcagagtcc
ctgtgtgctatagatgttaacagcggaaagtttacagcgaaatctacacaggaagatacg
gcggttattacgaatcttgaagccgccgaagaaattgcaagacagttaagacttagaaat
atagggggtataattgttattgattttatagatatgaaaaaagcttcgaacaggcgtaaa
gttttagaaacgcttcgcaaagctacgaaagttgataaagctaaaatagaaatatggcct
ataactaggcttggtcttatagagatgacgagagagagaaaaagaaagtcgttgttttct
attctcggtgatatttgtcctgtgtgtcacggactgagttttgttctttcaaaagagtct
atttttattaatgtttgtgatgaaataaaacagttgaaaattgacggttatgacggtaga
ataaaaataaaattaaatattgatgtcattgaatatttcatgaagaaaaaagcaagactt
gaagaattgttcggcgttgaatttgatatagaagcaagtacagaactattacgcgaagaa
tataagattttatatttgaatagttaa
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