Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008: TGRD_641
Help
Entry
TGRD_641 CDS
T00755
Name
(GenBank) putative LPS/organic solvent export system permease component LptF
KO
K01714
4-hydroxy-tetrahydrodipicolinate synthase [EC:
4.3.3.7
]
Organism
rsd
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Pathway
rsd00261
Monobactam biosynthesis
rsd00300
Lysine biosynthesis
rsd01100
Metabolic pathways
rsd01110
Biosynthesis of secondary metabolites
rsd01120
Microbial metabolism in diverse environments
rsd01230
Biosynthesis of amino acids
Module
rsd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TGRD_641
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
TGRD_641
Enzymes [BR:
rsd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase
TGRD_641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF4920
Motif
Other DBs
NCBI-ProteinID:
BAG14134
UniProt:
B1GYP1
LinkDB
All DBs
Position
966875..968029
Genome browser
AA seq
384 aa
AA seq
DB search
MIKKLHLYTIKESFGSFLLGVAVFSILFILDYVFELVDLFLSKGVSFFLVLKLFAFALPN
ILRLAIPMSVLFGILIAYGKLSEDNEITAMKSSGVNYRTLSLPIIILVCIISSFLLFFNH
FLSPAMNSNFVNLYREILTKKPLIKFTEKTTIELGEYRLYANKVNRKNNTLYEVSIYKFE
NKDDYCYGYNDEKSDKKSLFLQNNSKAWRIAASSAKVKSYQNGTQFFIYDGYWQKANFSD
INNMTHMTFKSYCFFIPSSEVMKEQTLSMSEKSSPEILKTIKTCKEQDIPFTANEIEFWI
RWIYALAPISFVLIALPIGIMAGKDGKTIGFGMSLSIILVYYMLLILALILSEKEYVPAN
LIMWLPNITVTAAGICLFTKMVKK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaactacatttatatactattaaagagtcttttggatctttccttcttgga
gtggctgtattttctattctttttattttggattatgtgtttgagcttgtagatcttttc
ctttcaaaaggagtatccttttttttagttctaaaattatttgctttcgcacttcccaac
attttaaggctagcgatacctatgtccgtgctttttggcatattaatcgcttacgggaaa
ctatcagaagacaatgaaatcacggcaatgaagtcttcaggagtgaactatagaactctt
tcgctacctataataattctcgtatgcataatatcttctttccttctgttttttaatcac
tttttgtcgccggcaatgaactccaatttcgtaaatctctatcgagaaattctcacaaaa
aaaccacttatcaaatttaccgaaaaaacaacaattgaattgggagaataccgtttatac
gcaaataaagtaaacagaaaaaataatactctctacgaagtaagcatatataaatttgaa
aataaggacgattattgttacggatataatgacgaaaaaagcgataaaaaaagtttattc
ttgcaaaacaacagcaaagcgtggcgtatagcggcatcttcggcaaaagtcaaatcctat
caaaacggtacccagttctttatttatgacggttattggcagaaagcaaacttttcagat
ataaataatatgacacatatgacttttaagtcttattgtttttttataccgagctccgag
gttatgaaagaacaaactttaagcatgtcagaaaagtcttcgcctgaaatccttaaaacc
ataaaaacctgtaaagaacaagatattccctttacggcaaacgaaattgaattctggatt
cgatggatttacgctctcgccccgatttcttttgtgcttattgcgttgcctataggaata
atggcaggcaaagacgggaaaaccataggttttggaatgagtttgagcatcatattagtc
tactatatgctacttatacttgcgttaatcttaagcgaaaaagagtatgttccggcaaat
cttataatgtggctcccgaacattacagttactgccgccggaatttgtttatttacaaaa
atggtaaaaaaataa
DBGET
integrated database retrieval system
