Ralstonia pseudosolanacearum FQY_4: F504_1140
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Entry
F504_1140 CDS
T02751
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse03410
Base excision repair
rse03430
Mismatch repair
rse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F504_1140 (recJ)
03430 Mismatch repair
F504_1140 (recJ)
03440 Homologous recombination
F504_1140 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rse03400
]
F504_1140 (recJ)
DNA repair and recombination proteins [BR:
rse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
F504_1140 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F504_1140 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F504_1140 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
PAP2
Motif
Other DBs
NCBI-ProteinID:
AGH83657
LinkDB
All DBs
Position
complement(1172132..1173829)
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AA seq
565 aa
AA seq
DB search
MTRIAIRPHSAETASLLAGHGIHPILARILAARGVARPSELSTELTDLLPPAQLKGIDDA
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
VALAARERPDVLVTVDNGIADVAGVAAANALDIDVVVTDHHMPGAQLPEARVIVNPNQPG
CGFPSKHLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDAN
NRLLVAQGLKRMRAGRMCAGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILASTLASMDGAGRHTIAVYN
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRCPGL
IVKFGGHAMAAGLSLHADGFDRFVETFEAVGREWLNESLLSRVLETDGEAEAECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQLGRGKQRFDAIWFNHAEPLGASA
YVAYRLDNNTFNGITRVQMVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgccatccgtccgcattccgccgagaccgccagcctgctggccggccac
ggcatccatcccatcctggcgcgcatcctggccgcgcgcggcgtggcccgacccagcgaa
ctgtcgaccgaactgaccgacctgctgccgcccgcgcagctcaagggcatcgacgacgcg
gcgcgctacctggccgacgcgatcgccgccggcaagcgcctgctgatcgtcgccgactac
gactgcgacggcgccaccgcctgcgcggtcggcgtgcgcgggctgcgcatgctgggcgcg
caggtcggctacatcgtgcccaaccgcttcgagtacggctacggcctgtcgcccgagatc
gtcgcgctggccgcgcgcgagcggccggacgtgctcgtcaccgtcgacaacggcatcgcc
gacgtggcgggcgtggcggcggccaacgcgctggacatcgacgtcgtcgtcaccgatcac
cacatgccgggcgcgcagttgcccgaggcccgcgtgatcgtcaacccgaaccagccgggc
tgcggctttccgagcaagcacctggcgggcgtgggcgtgatgttctacgtgttgctggcg
ctgcgggccgagctgcgcaaccgcggcgccttcacgccgcagaaccagccacgcctcgac
gcgctgctcgacctggtggcgctcggcaccgtggccgacgtggtccggctcgatgccaac
aaccggctgctggtggcgcagggcctcaagcgcatgcgcgcgggccggatgtgcgccggc
atcgcggcgctgttccgcgtggccgggcgcgaggcgcggcgcgcatccaccttcgacctc
ggcttcggcctgggcccgcgcctgaacgccgccggccgcctggccgacatgtcgctcggc
atcgaatgcctgctgaccgatgatttcgaccgcgccatggccatcgccgccgagctcgac
ggcatgaaccgggagcgtcgcgaaatcgaggccggcatgcagcaggaggccatggcgatc
ctcgcgtccacgctggccagcatggacggcgccggccgccacaccatcgcggtctacaac
gagacctggcaccagggcgtgatcggcatcgtcgcctcgcggctcaaggacaagttccac
cggccggtgatcaccttcgcgccgggcgacgacggcgtcatcaagggctcgggccgctcc
atccccggcttccacctgcgcgatgcgctggacgccgtgcacaagcgctgccccgggctg
atcgtcaagttcggcggccacgcgatggcggccgggctgtcgctgcatgcggacggcttc
gaccgctttgtcgagaccttcgaggcggtcggccgcgaatggctgaacgagtccctgctc
tcgcgggtgctcgaaaccgacggcgaggccgaagcggagtgcttcacgccgcagttcgtg
gagctgctcgaaacccacgtctggggccagggctttccggcgccgagcttctgcggcgag
ttcgacgtgctgtcgcaggccgtgctcaaggacaagcacctgaagctgcagctcgggcgc
ggcaagcagcgcttcgacgcgatctggttcaaccacgccgaaccgctcggcgcctcggcg
tacgtggcctaccggctggacaacaacaccttcaacggcatcacccgcgtgcagatggtg
atcgagcacgcgcagtag
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