Ralstonia pseudosolanacearum FQY_4: F504_1486
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Entry
F504_1486 CDS
T02751
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rse03016
]
F504_1486
Enzymes [BR:
rse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
F504_1486
Transfer RNA biogenesis [BR:
rse03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
F504_1486
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGH84002
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All DBs
Position
1557174..1557728
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AA seq
184 aa
AA seq
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MPAHRLFLAVKPDADAARRIAQRVALLRPDVGFKARPLRVERLHVTLHHLGDFVELPDTL
VARACEAAAGVALPPFEVIFDQVVSFHGRRDHRPFVLTGGVGLHALIDFQHALGAALERA
GLRVPQARFVPHVTLLYDRGGFAPKPIEPIAWTVREFVLIDSWLGRTRYDEKGRWPLREG
GLSS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcgcaccgcctgttcctggcggtcaagcccgatgcggatgcggccagacgcatc
gcgcagcgggtcgcgctgctgcggccggacgtcggcttcaaggccaggccgctgcgcgtg
gagcggctgcacgtcacgctgcatcacctgggggatttcgtcgaactgccggacaccctg
gtggcgcgtgcctgcgaggccgcggccggcgttgcgctgccgccgttcgaggtgatattc
gaccaggtggtgagcttccacggccggcgcgaccaccggccctttgtcctgacgggcggt
gttggcctgcatgccttgatcgacttccagcacgcgctgggcgctgcgctcgagcgcgcc
gggctgcgtgttccgcaggcgcgcttcgtgccgcacgtgaccctgctgtacgaccgcggc
ggctttgcgccgaagccgatcgagccgatcgcctggacggtgcgcgagttcgtgctgatc
gacagctggctcggcaggacgcgctatgacgagaaagggcgatggccgttgcgggagggc
ggcctatcgtcctga
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