Ralstonia pseudosolanacearum FQY_4: F504_2021
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Entry
F504_2021 CDS
T02751
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rse
Ralstonia pseudosolanacearum FQY_4
Pathway
rse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F504_2021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rse03019
]
F504_2021
03016 Transfer RNA biogenesis [BR:
rse03016
]
F504_2021
Enzymes [BR:
rse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F504_2021
Messenger RNA biogenesis [BR:
rse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F504_2021
Transfer RNA biogenesis [BR:
rse03016
]
Prokaryotic type
tRNA degradation factors
F504_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
S1_RRP5
KH_KhpA-B
S1_2
KH_NusA_2nd
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AGH84535
LinkDB
All DBs
Position
complement(2179376..2181529)
Genome browser
AA seq
717 aa
AA seq
DB search
MFNKIVKEFQWGNHKVRMETGEIARQASGAVLLDMDDTVVLATVVGAKNAKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVIHVLSI
NPEVPADIPALVAASAALAVSGLPFNGPVGAARVGYKDGQYLLNPNRAQLAHSDLDLVVA
GTERAVLMVESEANQLSEEVMLGAVVYGHEQMQIAINAIHDLVRDGGKPEWDWQAAPKNE
ALVAKVSELSLADLQAAYQLRQKSARSQKLKEVYASVAAKLAEAGVEADGVEVDNILFEL
ESKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGTKS
DEQIIDALQGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKEDE
FAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVLTD
ILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILGKMQAA
MGHARTELSEHAPRMITVKINPEKIRDVIGKGGSTIQALTKETGCTIDIQEDGTITIAST
SSEGMAEAKRRIEGITAEAEVGKIYSGTVLKLLDFGAIVNILPGKDGLLHISEIANERVN
QVSDYVKEGQMVRVKLLSTDEKGRMRLSIKAAKAEEGDVPATAPQAPGAGDATSQQQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcgtcaaggaattccagtggggcaaccacaaggtgcgcatggagacg
ggcgagatcgcccgccaggccagcggcgccgtgctgctcgacatggacgacaccgtggtg
ctggccaccgtggtgggcgccaagaacgccaagccgggccaggatttcttcccgctgacc
gtcgactacatcgagaagacctacgccgccggcaagatcccgggtggcttcttcaagcgt
gaaggccgtccgtcggaaaacgagacgctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtcgtcatccacgtgctgtcgatc
aacccggaagtgccggccgacatcccggcgctggtggccgcttcggccgcgctggccgtg
tcgggcctgccgttcaacggcccggtgggcgccgcccgcgtgggttacaaggacggccag
tacctgctgaacccgaaccgcgcgcaactggcgcattcggacctggacctggtggttgcc
ggcaccgagcgtgccgtgctgatggtcgaatccgaagccaaccagctgtcggaagaggtg
atgctgggcgccgtggtgtacggccatgagcagatgcagatcgccatcaatgcgatccac
gacctggtgcgcgacggcggcaagccggagtgggactggcaagcggcgccgaagaacgaa
gccctggtcgccaaggtgtccgagctgagcctggccgatctgcaagccgcttaccagctg
cgccagaagtcggcccgcagccagaagctgaaggaagtctacgcatcggtcgcggccaag
ctggccgaagccggcgtggaagccgacggcgtggaagtcgacaacatcctgttcgagctc
gaatcgaagatcgtgcgcggccagattctgaacggcgagccgcgtatcgacggtcgcgac
acccgcacggtgcgcccgatcgagatccgctcgtcggtgctgccgcgcgcgcacggctcg
gcgctgttcacgcgcggtgagacgcaagcgctggtggtggccaccctgggcaccaagagc
gacgagcagatcatcgacgcgctgcagggcgagtaccgcgaccgcttcatgctccactac
aacatgccgccgttcgccaccggcgaaaccggccgcgtgggcagcccgaagcgccgcgaa
atcggccacggccgcctggccaagcgcgcgctgatcccggtgctgccgaaggaagacgaa
ttcgcctacacgattcgtctggtgtcggaaatcaccgagtcgaacggctcgtcgtcgatg
gcttcggtctgcggtggctgcctggcgctgatggatgccggcgtgccggtcaaggcgcac
gtggccggcgtggccatgggcctgatcctggagggcaacaagttcgccgtgctgaccgac
atcctgggcgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgataac
ggcatcaccgcgctgcagatggacatcaaggtgcagggcatcaccaaggaaatcatgcag
gtggctctggcgcaggccaaggaaggccgtctgcatatcctgggcaagatgcaggccgcg
atgggccatgcacgcaccgaactgtcggagcatgcgccgcgcatgatcaccgtcaagatc
aacccggagaagatccgcgacgtgatcggcaagggcggctcgaccatccaggcgctgacc
aaggaaaccggctgcacgatcgacatccaggaagacggcacgatcaccatcgcgtcgacc
tcgtccgagggcatggccgaagccaagcgccgcatcgaaggcatcacggccgaagccgaa
gtgggcaagatctacagcggcaccgtgctcaagctgctggacttcggtgcgatcgtcaac
atcctgccgggcaaggatggcctgctgcacatctcggagatcgccaacgagcgcgtcaac
caggtgtcggactacgtcaaggaaggccagatggtgcgcgtgaagctgctgagcaccgac
gaaaagggccgcatgcgcctgtcgatcaaggccgccaaggctgaggaaggcgatgtgccg
gccaccgcgccgcaggcgccgggcgccggcgacgcgacgtcgcagcagcagtaa
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